RNA–Protein interactions for RNA: ENST00000380340.8

APH1B-202, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-202ENST00000380340 TAF1P21675 1872 aa13.55□□□□□ -0.24
APH1B-202ENST00000380340 SCN9AQ15858 1988 aa13.55□□□□□ -0.24
APH1B-202ENST00000380340 MMP14P50281 582 aa13.55□□□□□ -0.24
APH1B-202ENST00000380340 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
APH1B-202ENST00000380340 DPF3Q92784 378 aa13.55□□□□□ -0.24
APH1B-202ENST00000380340 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
APH1B-202ENST00000380340 WNT10BO00744 389 aa13.54□□□□□ -0.24
APH1B-202ENST00000380340 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
APH1B-202ENST00000380340 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
APH1B-202ENST00000380340 CNGB1Q14028 1251 aaPredicted RBP13.54□□□□□ -0.24
APH1B-202ENST00000380340 PROSER3Q2NL68 480 aa13.54□□□□□ -0.24
APH1B-202ENST00000380340 APOBEC3FQ8IUX4 373 aaKnown RBP13.54□□□□□ -0.24
APH1B-202ENST00000380340 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
APH1B-202ENST00000380340 ANXA1P04083 346 aa13.53□□□□□ -0.24
APH1B-202ENST00000380340 NEFMP07197 916 aa13.53□□□□□ -0.24
APH1B-202ENST00000380340 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
APH1B-202ENST00000380340 WNK4Q96J92 1243 aa13.53□□□□□ -0.24
APH1B-202ENST00000380340 PRO3102Q9H379 93 aa13.53□□□□□ -0.24
APH1B-202ENST00000380340 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
APH1B-202ENST00000380340 A0A1W2PPC1 479 aa13.52□□□□□ -0.25
APH1B-202ENST00000380340 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
APH1B-202ENST00000380340 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
APH1B-202ENST00000380340 PTCH2Q9Y6C5 1203 aa13.52□□□□□ -0.25
APH1B-202ENST00000380340 MYO3BQ8WXR4 1341 aa13.51□□□□□ -0.25
APH1B-202ENST00000380340 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
APH1B-202ENST00000380340 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
APH1B-202ENST00000380340 MYCP01106 439 aaPredicted RBP13.51□□□□□ -0.25
APH1B-202ENST00000380340 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
APH1B-202ENST00000380340 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
APH1B-202ENST00000380340 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
APH1B-202ENST00000380340 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
APH1B-202ENST00000380340 CAP1Q01518 475 aa13.5□□□□□ -0.25
APH1B-202ENST00000380340 DACT2Q5SW24 774 aa13.5□□□□□ -0.25
APH1B-202ENST00000380340 CLMNQ96JQ2 1002 aa13.5□□□□□ -0.25
APH1B-202ENST00000380340 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
APH1B-202ENST00000380340 XDHP47989 1333 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
APH1B-202ENST00000380340 SASH1O94885 1247 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 PTPN18Q99952 460 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 ISCA1Q9BUE6 129 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 TSPYL4Q9UJ04 414 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
APH1B-202ENST00000380340 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 STRIP1Q5VSL9 837 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 NKX2-3Q8TAU0 364 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
APH1B-202ENST00000380340 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
APH1B-202ENST00000380340 UNC80Q8N2C7 3258 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
APH1B-202ENST00000380340 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 ZFYVE28Q9HCC9 887 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 COL4A1P02462 1669 aa13.47□□□□□ -0.25
APH1B-202ENST00000380340 PSME4Q14997 1843 aa13.46□□□□□ -0.25
APH1B-202ENST00000380340 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
APH1B-202ENST00000380340 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
APH1B-202ENST00000380340 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
APH1B-202ENST00000380340 CCDC152Q4G0S7 254 aa13.46□□□□□ -0.25
APH1B-202ENST00000380340 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
APH1B-202ENST00000380340 ZBED3Q96IU2 234 aaPredicted RBP13.46□□□□□ -0.25
APH1B-202ENST00000380340 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.25
APH1B-202ENST00000380340 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 SOX1O00570 391 aaPredicted RBP13.45□□□□□ -0.26
APH1B-202ENST00000380340 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
APH1B-202ENST00000380340 WDHD1O75717 1129 aaPredicted RBP13.45□□□□□ -0.26
APH1B-202ENST00000380340 GNRH1P01148 92 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 GJA5P36382 358 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 PRMT2P55345 433 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 KIF22Q14807 665 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 ANKRD13AQ8IZ07 590 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 SHISA4Q96DD7 197 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 LRCH3Q96II8 777 aa13.45□□□□□ -0.26
APH1B-202ENST00000380340 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
APH1B-202ENST00000380340 UBE2Q1Q7Z7E8 422 aa13.44□□□□□ -0.26
APH1B-202ENST00000380340 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
APH1B-202ENST00000380340 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
APH1B-202ENST00000380340 MED23Q9ULK4 1368 aa13.44□□□□□ -0.26
APH1B-202ENST00000380340 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
APH1B-202ENST00000380340 PPP2R1AP30153 589 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 TTLL5Q6EMB2 1281 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 KIAA0825Q8IV33 1275 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 ZBTB38Q8NAP3 1195 aaPredicted RBP13.43□□□□□ -0.26
APH1B-202ENST00000380340 MS4A4AQ96JQ5 239 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 COL25A1Q9BXS0 654 aaPredicted RBP13.43□□□□□ -0.26
APH1B-202ENST00000380340 STXBP5LQ9Y2K9 1186 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 LAMB1P07942 1786 aa13.43□□□□□ -0.26
APH1B-202ENST00000380340 GJB1P08034 283 aa13.42□□□□□ -0.26
APH1B-202ENST00000380340 GJA8P48165 433 aa13.42□□□□□ -0.26
APH1B-202ENST00000380340 DEFB123Q8N688 67 aa13.42□□□□□ -0.26
APH1B-202ENST00000380340 OPTNQ96CV9 577 aa13.42□□□□□ -0.26
APH1B-202ENST00000380340 SSC5DA1L4H1 1573 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms