RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ZRSR1Q15695 479 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 ZSCAN25Q6NSZ9 544 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 CCDC73Q6ZRK6 1079 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 ZNF446Q9NWS9 450 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 BABAM1Q9NWV8 329 aa14.55□□□□□ -0.08
PRPF40B-202ENST00000380281 KINO60870 393 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 PROSER2Q86WR7 435 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 GOLPH3LQ9H4A5 285 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 HDAC5Q9UQL6 1122 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 PAXBP1Q9Y5B6 917 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 AGLP35573 1532 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 CYP2C19P33261 490 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 MCMDC2Q4G0Z9 681 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 AOPEPQ8N6M6 819 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 CLSTN2Q9H4D0 955 aa14.54□□□□□ -0.08
PRPF40B-202ENST00000380281 POLR3GO15318 223 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 HOXB7P09629 217 aa14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 CABP4P57796 275 aa14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 TEX2Q8IWB9 1127 aa14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 METTL22Q9BUU2 404 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 DDX19AQ9NUU7 478 aaKnown RBP14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 SMC2O95347 1197 aa14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 TATP17735 454 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-202ENST00000380281 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.08
PRPF40B-202ENST00000380281 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
PRPF40B-202ENST00000380281 MARCKSP29966 332 aaPredicted RBP14.52□□□□□ -0.08
PRPF40B-202ENST00000380281 GYS2P54840 703 aa14.52□□□□□ -0.08
PRPF40B-202ENST00000380281 CCDC82Q8N4S0 544 aa14.52□□□□□ -0.08
PRPF40B-202ENST00000380281 APPP05067 770 aa14.52□□□□□ -0.09
PRPF40B-202ENST00000380281 IFIT1P09914 478 aaKnown RBP14.52□□□□□ -0.09
PRPF40B-202ENST00000380281 RESTQ13127 1097 aa14.52□□□□□ -0.09
PRPF40B-202ENST00000380281 C10orf67Q8IYJ2 551 aa14.52□□□□□ -0.09
PRPF40B-202ENST00000380281 FAM177A1Q8N128 213 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-202ENST00000380281 RGPD1P0DJD0 1748 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 USP42Q9H9J4 1324 aaKnown RBP14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 TRIM66O15016 1216 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 SLC52A2Q9HAB3 445 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 SKILP12757 684 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 ATP2B1P20020 1258 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 PAG1Q9NWQ8 432 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 DENND2AQ9ULE3 1009 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 ZNF609O15014 1411 aa14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 NPHP4O75161 1426 aaPredicted RBP14.51□□□□□ -0.09
PRPF40B-202ENST00000380281 SYNE4Q8N205 404 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 STK38Q15208 465 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 AIFM3Q96NN9 605 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 CFAP45Q9UL16 551 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 NWD1Q149M9 1564 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 ATP5JP18859 108 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 GOLGA8FQ08AF8 430 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 GOLGA8DPQ0D2H9 430 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 NSUN7Q8NE18 718 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 FAM53CQ9NYF3 392 aa14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
PRPF40B-202ENST00000380281 CPLX1O14810 134 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 CTDNEP1O95476 244 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 SYT10Q6XYQ8 523 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 TSPYL1Q9H0U9 437 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 E7EWF7 191 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 ADORA1P30542 326 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 KRT32Q14532 448 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 DHX32Q7L7V1 743 aaKnown RBP14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 IL17RAQ96F46 866 aa14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-202ENST00000380281 CCDC69A6NI79 296 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 ERCC6LQ2NKX8 1250 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 HMG20BQ9P0W2 317 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 LCMT1Q9UIC8 334 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 LOC102724159A0A0B4J2E5 919 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 GPTP24298 496 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 LMOD1P29536 600 aaPredicted RBP14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 PWP2Q15269 919 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 LRRN4CLQ8ND94 238 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 CLIC4Q9Y696 253 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 UBR1Q8IWV7 1749 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 A0A1B0GUL7 405 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 CYP27B1O15528 508 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 HSPD1P10809 573 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 GNL2Q13823 731 aaKnown RBP14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 PTPN14Q15678 1187 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 SPECC1Q5M775 1068 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 KRBA2Q6ZNG9 492 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 INCENPQ9NQS7 918 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 TOMM22Q9NS69 142 aa14.48□□□□□ -0.09
PRPF40B-202ENST00000380281 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 PHKG2P15735 406 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 KBTBD3Q8NAB2 608 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 FAM89AQ96GI7 184 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 MYL10Q9BUA6 226 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 KLF18A0A0U1RQI7 1052 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 M0R2C6 588 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 ST5P78524 1137 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 KCNB2Q92953 911 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 RASSF4Q9H2L5 321 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 STRN4Q9NRL3 753 aa14.47□□□□□ -0.09
PRPF40B-202ENST00000380281 ERBB3P21860 1342 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms