RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 GYS2P54840 703 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 TGFB2P61812 414 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 NUCB2P80303 420 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 HS1BP3Q53T59 392 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 ZNF790Q6PG37 636 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 ZNF652Q9Y2D9 606 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 IL17RAQ96F46 866 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 SPEGQ15772 3267 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 GRIN3BO60391 1043 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 STK3Q13188 491 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 SASH1O94885 1247 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 PTGER2P43116 358 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 CLEC4GQ6UXB4 293 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 KAT6BQ8WYB5 2073 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 C10orf71Q711Q0 1435 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 CASTP20810 708 aaKnown RBP8.79□□□□□ -1
GPCPD1-201ENST00000379019 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 STOX1Q6ZVD7 989 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 CERS3Q8IU89 383 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 LINC00116Q8NCU8 138 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 CBX8Q9HC52 389 aa8.79□□□□□ -1
GPCPD1-201ENST00000379019 BTBD11A6QL63 1104 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 F13A1P00488 732 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 ABL1P00519 1130 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 CHMP4BQ9H444 224 aaKnown RBP8.78□□□□□ -1
GPCPD1-201ENST00000379019 STX6O43752 255 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 CTDNEP1O95476 244 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 GNAI3P08754 354 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 TERF1P54274 439 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 FGD1P98174 961 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 ZSCAN22P10073 491 aaPredicted RBP8.78□□□□□ -1
GPCPD1-201ENST00000379019 FBXO38Q6PIJ6 1188 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 LCMT1Q9UIC8 334 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 ASAP1Q9ULH1 1129 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 CYP19A1P11511 503 aaPredicted RBP8.78□□□□□ -1
GPCPD1-201ENST00000379019 CEBPZQ03701 1054 aaKnown RBP8.78□□□□□ -1
GPCPD1-201ENST00000379019 PRPF40BQ6NWY9 871 aaKnown RBP8.78□□□□□ -1
GPCPD1-201ENST00000379019 DNAJC25Q9H1X3 360 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 NARFQ9UHQ1 456 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 ZNF215Q9UL58 517 aaPredicted RBP8.78□□□□□ -1
GPCPD1-201ENST00000379019 RAD50Q92878 1312 aa8.78□□□□□ -1
GPCPD1-201ENST00000379019 NECTIN1Q15223 517 aa8.77□□□□□ -1
GPCPD1-201ENST00000379019 VPS53Q5VIR6 699 aa8.77□□□□□ -1
GPCPD1-201ENST00000379019 CHST3Q7LGC8 479 aa8.77□□□□□ -1
GPCPD1-201ENST00000379019 RFC4P35249 363 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 DACT1Q9NYF0 836 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 TMEM87AQ8NBN3 555 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 STAP2Q9UGK3 403 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 ERVV-1B6SEH8 477 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 FOXP2O15409 715 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 HSP90B1P14625 803 aaKnown RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 CRKLP46109 303 aaKnown RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 KIAA2012Q0VF49 1180 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 ZFP91Q96JP5 570 aaPredicted RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 TRMT1Q9NXH9 659 aaKnown RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 GNPATO15228 680 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 ANO6Q4KMQ2 910 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 OTUD7BQ6GQQ9 843 aa8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 EAF2Q96CJ1 260 aaPredicted RBP8.77□□□□□ -1.01
GPCPD1-201ENST00000379019 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 ITPK1Q13572 414 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 FAM53CQ9NYF3 392 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 ZPR1O75312 459 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 IQCB1Q15051 598 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 ZSCAN25Q6NSZ9 544 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 RPAP2Q8IXW5 612 aaPredicted RBP8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 ATP8B2P98198 1209 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 SNW1Q13573 536 aaKnown RBP8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 HSP90AB3PQ58FF7 597 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 CHPF2Q9P2E5 772 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 CGNQ9P2M7 1197 aaKnown RBP8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 ECM29Q5VYK3 1845 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 SASH3O75995 380 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 BAZ2BQ9UIF8 2168 aaKnown RBP8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 DLEC1Q9Y238 1755 aa8.76□□□□□ -1.01
GPCPD1-201ENST00000379019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 CCZ1BP86790 482 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 CCZ1P86791 482 aaPredicted RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 PTF1AQ7RTS3 328 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 PLA2G4DQ86XP0 818 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 LRRCC1Q9C099 1032 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 RANBP2P49792 3224 aaKnown RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 UNC80Q8N2C7 3258 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 ZC3H4Q9UPT8 1303 aaKnown RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 IRX5P78411 483 aaPredicted RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 RAB11FIP4Q86YS3 637 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 ST18O60284 1047 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 ST5P78524 1137 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 HMGN5P82970 282 aaKnown RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 POLA2Q14181 598 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 SSH3Q8TE77 659 aa8.75□□□□□ -1.01
GPCPD1-201ENST00000379019 CHMP4CQ96CF2 233 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms