RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
THUMPD2-201ENST00000378727 FOXD4L1Q9NU39 408 aa20.87■□□□□ 0.93
THUMPD2-201ENST00000378727 APBA3O96018 575 aa20.86■□□□□ 0.93
THUMPD2-201ENST00000378727 MYO5AQ9Y4I1 1855 aaKnown RBP20.86■□□□□ 0.93
THUMPD2-201ENST00000378727 TM4SF1P30408 202 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 SLC27A2O14975 620 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 CYP2E1P05181 493 aaPredicted RBP20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 HSP90AA1P07900 732 aaKnown RBP20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 UQCRFS1P1P0C7P4 283 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 KCNJ4P48050 445 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 NFKBIBQ15653 356 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 ADCK5Q3MIX3 580 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 POTEAQ6S8J7 498 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 CHMP5Q9NZZ3 219 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 MINPP1Q9UNW1 487 aa20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 TNS1Q9HBL0 1735 aaKnown RBP20.85■□□□□ 0.93
THUMPD2-201ENST00000378727 ZNF827Q17R98 1081 aa20.84■□□□□ 0.93
THUMPD2-201ENST00000378727 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
THUMPD2-201ENST00000378727 MAST3O60307 1309 aa20.84■□□□□ 0.93
THUMPD2-201ENST00000378727 RPS8P62241 208 aaKnown RBP20.84■□□□□ 0.93
THUMPD2-201ENST00000378727 HMG20BQ9P0W2 317 aa20.84■□□□□ 0.93
THUMPD2-201ENST00000378727 WTIPA6NIX2 430 aaPredicted RBP20.83■□□□□ 0.93
THUMPD2-201ENST00000378727 NPHP1O15259 732 aa20.83■□□□□ 0.93
THUMPD2-201ENST00000378727 MCM2P49736 904 aa20.83■□□□□ 0.93
THUMPD2-201ENST00000378727 PRR5LQ6MZQ0 368 aa20.83■□□□□ 0.93
THUMPD2-201ENST00000378727 OSBP2Q969R2 916 aa20.83■□□□□ 0.93
THUMPD2-201ENST00000378727 TTC14Q96N46 770 aa20.83■□□□□ 0.93
THUMPD2-201ENST00000378727 M0R2C6 588 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 ZFYP08048 801 aaPredicted RBP20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 BCAMP50895 628 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 IL27Q8NEV9 243 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 AKT1S1Q96B36 256 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 PIH1D3Q9NQM4 214 aaKnown RBP20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 TAF6LQ9Y6J9 622 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 CPA1P15085 419 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 CASTP20810 708 aaKnown RBP20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 HMGB2P26583 209 aaKnown RBP20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 RASGRF1Q13972 1273 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 VPS53Q5VIR6 699 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 TM6SF1Q9BZW5 370 aa20.82■□□□□ 0.92
THUMPD2-201ENST00000378727 LRRFIP1Q32MZ4 808 aaKnown RBP20.81■□□□□ 0.92
THUMPD2-201ENST00000378727 SPATA5Q8NB90 893 aa20.81■□□□□ 0.92
THUMPD2-201ENST00000378727 ZSWIM6Q9HCJ5 1215 aa20.81■□□□□ 0.92
THUMPD2-201ENST00000378727 RPAP1Q9BWH6 1393 aaPredicted RBP20.81■□□□□ 0.92
THUMPD2-201ENST00000378727 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
THUMPD2-201ENST00000378727 SERPINB2P05120 415 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 DDR1Q08345 913 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 UBE4AQ14139 1066 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 TSGA10IPQ3SY00 556 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 RNF20Q5VTR2 975 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 NOL8Q76FK4 1167 aaKnown RBP20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 CIZ1Q9ULV3 898 aaPredicted RBP20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 U3KPZ7 1027 aaPredicted RBP20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 DOCK2Q92608 1830 aa20.8■□□□□ 0.92
THUMPD2-201ENST00000378727 COL9A3Q14050 684 aaPredicted RBP20.79■□□□□ 0.92
THUMPD2-201ENST00000378727 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
THUMPD2-201ENST00000378727 WASHC4Q2M389 1173 aa20.79■□□□□ 0.92
THUMPD2-201ENST00000378727 APPBP2Q92624 585 aa20.79■□□□□ 0.92
THUMPD2-201ENST00000378727 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
THUMPD2-201ENST00000378727 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.79■□□□□ 0.92
THUMPD2-201ENST00000378727 ZNF804BA4D1E1 1349 aa20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 HSPD1P10809 573 aaKnown RBP20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 ADD2P35612 726 aa20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 AK2P54819 239 aa20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 RGPD3A6NKT7 1758 aaPredicted RBP20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 RGPD4Q7Z3J3 1758 aa20.78■□□□□ 0.92
THUMPD2-201ENST00000378727 POLRMTO00411 1230 aaKnown RBP20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 RUFY3Q7L099 469 aa20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 GYG1P46976 350 aa20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 CUL4AQ13619 759 aa20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 SLC9C2Q5TAH2 1124 aa20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 CYP46A1Q9Y6A2 500 aa20.77■□□□□ 0.92
THUMPD2-201ENST00000378727 FOXP2O15409 715 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 CYP21A2P08686 494 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 FBXO41Q8TF61 875 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 CRY2Q49AN0 593 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 ZSCAN25Q6NSZ9 544 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 PDRG1Q9NUG6 133 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 WWC3Q9ULE0 1092 aa20.76■□□□□ 0.91
THUMPD2-201ENST00000378727 PDE6AP16499 860 aa20.75■□□□□ 0.91
THUMPD2-201ENST00000378727 ST5P78524 1137 aa20.75■□□□□ 0.91
THUMPD2-201ENST00000378727 GRAPQ13588 217 aa20.75■□□□□ 0.91
THUMPD2-201ENST00000378727 UBE3CQ15386 1083 aa20.75■□□□□ 0.91
THUMPD2-201ENST00000378727 GRAPLQ8TC17 118 aaPredicted RBP20.75■□□□□ 0.91
THUMPD2-201ENST00000378727 TCRBV5S4A2TA0A5A2 114 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 KLRK1P26718 216 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 PSMA5P28066 241 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 SLC51AQ86UW1 340 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 ANKRD2Q9GZV1 360 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 RAB3GAP1Q15042 981 aa20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 FAM84BQ96KN1 310 aaPredicted RBP20.74■□□□□ 0.91
THUMPD2-201ENST00000378727 LARP6Q9BRS8 491 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms