RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 TPX2Q9ULW0 747 aaKnown RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 SPG7Q9UQ90 795 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ATP6V0A2Q9Y487 856 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 IRX4P78413 519 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 DACT1Q9NYF0 836 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 MTUS1Q9ULD2 1270 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 CLUL1Q15846 466 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ORC3Q9UBD5 711 aaPredicted RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ABCF2Q9UG63 623 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 WDHD1O75717 1129 aaPredicted RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 PFDN1O60925 122 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.35
ITM2B-202ENST00000378565 CABP4P57796 275 aa12.83□□□□□ -0.35
ITM2B-202ENST00000378565 CCDC122Q5T0U0 273 aa12.83□□□□□ -0.35
ITM2B-202ENST00000378565 NAPGQ99747 312 aaPredicted RBP12.83□□□□□ -0.35
ITM2B-202ENST00000378565 C8orf74Q6P047 294 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
ITM2B-202ENST00000378565 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 BICD1Q96G01 975 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 MGEA5O60502 916 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 SNX16P57768 344 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 NEK11Q8NG66 645 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 AFMP43652 599 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 NFE2L2Q16236 605 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 CABS1Q96KC9 395 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 IFNKQ9P0W0 207 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 GOLGA4Q13439 2230 aaKnown RBP12.83□□□□□ -0.36
ITM2B-202ENST00000378565 OAS2P29728 719 aaKnown RBP12.83□□□□□ -0.36
ITM2B-202ENST00000378565 ARID5AQ03989 594 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 PTPRCP08575 1304 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 PEX19P40855 299 aa12.83□□□□□ -0.36
ITM2B-202ENST00000378565 PPM1FP49593 454 aaPredicted RBP12.82□□□□□ -0.36
ITM2B-202ENST00000378565 PPP1R9BQ96SB3 815 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 EEF2P13639 858 aaKnown RBP12.82□□□□□ -0.36
ITM2B-202ENST00000378565 INF2Q27J81 1249 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 TRIM68Q6AZZ1 485 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 F13A1P00488 732 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
ITM2B-202ENST00000378565 I3L4J1 428 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 PLCB3Q01970 1234 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 ZBTB9Q96C00 473 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
ITM2B-202ENST00000378565 AKR1B15C9JRZ8 316 aaPredicted RBP12.82□□□□□ -0.36
ITM2B-202ENST00000378565 ATF3P18847 181 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
ITM2B-202ENST00000378565 SEL1L2Q5TEA6 688 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
ITM2B-202ENST00000378565 SATB1Q01826 763 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
ITM2B-202ENST00000378565 IFIT1P09914 478 aaKnown RBP12.81□□□□□ -0.36
ITM2B-202ENST00000378565 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
ITM2B-202ENST00000378565 HIP1RO75146 1068 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 DNM1Q05193 864 aaKnown RBP12.81□□□□□ -0.36
ITM2B-202ENST00000378565 CCDC141Q6ZP82 1450 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 DBN1Q16643 649 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 E7EVH7 732 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 TRIM27P14373 513 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 SLC26A6Q9BXS9 759 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 VSIG1Q86XK7 387 aa12.81□□□□□ -0.36
ITM2B-202ENST00000378565 BCAP29Q9UHQ4 241 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 TXNDC9O14530 226 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 NCOA7Q8NI08 942 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 TACC3Q9Y6A5 838 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 NBPF7P0C2Y1 421 aaPredicted RBP12.8□□□□□ -0.36
ITM2B-202ENST00000378565 CAVIN4Q5BKX8 364 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 Q9H521 79 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 PHLDB3Q6NSJ2 640 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 RUFY3Q7L099 469 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 CAPN7Q9Y6W3 813 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
ITM2B-202ENST00000378565 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 NUCB1Q02818 461 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 TRIM14Q14142 442 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
ITM2B-202ENST00000378565 MMRN2Q9H8L6 949 aa12.8□□□□□ -0.36
ITM2B-202ENST00000378565 THEGQ9P2T0 379 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms