RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MARCKSP29966 332 aaPredicted RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 IL15P40933 162 aaPredicted RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 USP5P45974 858 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 IMMTQ16891 758 aaKnown RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 SUSD4Q5VX71 490 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 DZIP1Q86YF9 867 aaKnown RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 CERKQ8TCT0 537 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 PHKBQ93100 1093 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
CKAP2-203ENST00000378037 IBTKQ9P2D0 1353 aaPredicted RBP9.57□□□□□ -0.88
CKAP2-203ENST00000378037 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 PRKAB2O43741 272 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 STX6O43752 255 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SPECC1Q5M775 1068 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 ANKRD18AQ8IVF6 992 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 RPGRQ92834 1020 aaKnown RBP9.56□□□□□ -0.88
CKAP2-203ENST00000378037 KAZALD1Q96I82 304 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 GRPEL1Q9HAV7 217 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 FAM170AA1A519 330 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 MPHOSPH10O00566 681 aaKnown RBP9.56□□□□□ -0.88
CKAP2-203ENST00000378037 PDIA6Q15084 440 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 MCMDC2Q4G0Z9 681 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 NLRP3Q96P20 1036 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 DENND2AQ9ULE3 1009 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SLC4A4Q9Y6R1 1079 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 EP400Q96L91 3159 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 PDE4DIPQ5VU43 2346 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SSH2Q76I76 1423 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 BECN2A8MW95 431 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SLC27A2O14975 620 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 MARCH6O60337 910 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SYT1P21579 422 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 TRIM29Q14134 588 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 RBM26Q5T8P6 1007 aaKnown RBP9.56□□□□□ -0.88
CKAP2-203ENST00000378037 QTRT2Q9H974 415 aaKnown RBP9.56□□□□□ -0.88
CKAP2-203ENST00000378037 AATFQ9NY61 560 aaKnown RBP eCLIP9.56□□□□□ -0.88
CKAP2-203ENST00000378037 USP31Q70CQ4 1352 aa9.56□□□□□ -0.88
CKAP2-203ENST00000378037 SLC5A1P13866 664 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 CAVIN4Q5BKX8 364 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 MARCH10Q8NA82 808 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-203ENST00000378037 PI4K2BQ8TCG2 481 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 NOL10Q9BSC4 688 aaKnown RBP9.55□□□□□ -0.88
CKAP2-203ENST00000378037 UBAC1Q9BSL1 405 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 ZNF652Q9Y2D9 606 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 STK38Q15208 465 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 ME3Q16798 604 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 USP25Q9UHP3 1055 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 GPAA1O43292 621 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
CKAP2-203ENST00000378037 MAP3K12Q12852 859 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 AKAP2Q9Y2D5 859 aa9.55□□□□□ -0.88
CKAP2-203ENST00000378037 MEGF6O75095 1541 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 XRCC6P12956 609 aaKnown RBP eCLIP9.54□□□□□ -0.88
CKAP2-203ENST00000378037 HSPA1LP34931 641 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 RBM25P49756 843 aaKnown RBP9.54□□□□□ -0.88
CKAP2-203ENST00000378037 CCDC152Q4G0S7 254 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 CCDC191Q8NCU4 936 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 U3KPZ7 1027 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-203ENST00000378037 KDRP35968 1356 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 APBA3O96018 575 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 CPLX2Q6PUV4 134 aaKnown RBP9.54□□□□□ -0.88
CKAP2-203ENST00000378037 CDC37L1Q7L3B6 337 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 GPIHBP1Q8IV16 184 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 SLC26A6Q9BXS9 759 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 PUS7LQ9H0K6 701 aaKnown RBP9.54□□□□□ -0.88
CKAP2-203ENST00000378037 TPCN1Q9ULQ1 816 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 PTPN21Q16825 1174 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 TMEM67Q5HYA8 995 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 NLRP10Q86W26 655 aa9.54□□□□□ -0.88
CKAP2-203ENST00000378037 ORC3Q9UBD5 711 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-203ENST00000378037 WDR33Q9C0J8 1336 aaKnown RBP9.53□□□□□ -0.88
CKAP2-203ENST00000378037 ZNF532Q9HCE3 1301 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 FAM47AQ5JRC9 791 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 SYAP1Q96A49 352 aaPredicted RBP9.53□□□□□ -0.88
CKAP2-203ENST00000378037 AIFM3Q96NN9 605 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 KIF2CQ99661 725 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
CKAP2-203ENST00000378037 HEG1Q9ULI3 1381 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
CKAP2-203ENST00000378037 ERVV-2B6SEH9 535 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 HIP1O00291 1037 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 PRC1O43663 620 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 FILIP1Q7Z7B0 1213 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 GAS2L3Q86XJ1 694 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 OSBP2Q969R2 916 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 RREB1Q92766 1687 aa9.53□□□□□ -0.88
CKAP2-203ENST00000378037 CYP21A2P08686 494 aa9.52□□□□□ -0.88
CKAP2-203ENST00000378037 CTSWP56202 376 aa9.52□□□□□ -0.88
CKAP2-203ENST00000378037 TCP10Q12799 353 aa9.52□□□□□ -0.88
CKAP2-203ENST00000378037 ITPK1Q13572 414 aa9.52□□□□□ -0.88
CKAP2-203ENST00000378037 LRRFIP1Q32MZ4 808 aaKnown RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms