RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 MRC1P22897 1456 aa21.07■□□□□ 0.96
GNE-201ENST00000377902 FAM160A1Q05DH4 1040 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 TTLL5Q6EMB2 1281 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 NBPF11Q86T75 865 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 CGNQ9P2M7 1197 aaKnown RBP21.06■□□□□ 0.96
GNE-201ENST00000377902 PCDHA7Q9UN72 937 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 A0A087WZG4 1122 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 LLPHQ9BRT6 129 aaKnown RBP21.06■□□□□ 0.96
GNE-201ENST00000377902 GJB4Q9NTQ9 266 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
GNE-201ENST00000377902 CTAGE5O15320 804 aa21.05■□□□□ 0.96
GNE-201ENST00000377902 EXOSC10Q01780 885 aaKnown RBP21.05■□□□□ 0.96
GNE-201ENST00000377902 CCAR2Q8N163 923 aaKnown RBP21.05■□□□□ 0.96
GNE-201ENST00000377902 KBTBD3Q8NAB2 608 aa21.05■□□□□ 0.96
GNE-201ENST00000377902 KIF18AQ8NI77 898 aa21.05■□□□□ 0.96
GNE-201ENST00000377902 E7EWF7 191 aa21.05■□□□□ 0.96
GNE-201ENST00000377902 PDIA3P30101 505 aaKnown RBP21.05■□□□□ 0.96
GNE-201ENST00000377902 RAB11FIP4Q86YS3 637 aa21.05■□□□□ 0.96
GNE-201ENST00000377902 ANO10Q9NW15 660 aa21.05■□□□□ 0.96
GNE-201ENST00000377902 NDUFA8P51970 172 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 ELF2Q15723 593 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 LMBR1LQ6UX01 489 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 LRP10Q7Z4F1 713 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 SDF4Q9BRK5 362 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 LAMA4Q16363 1823 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 BIN1O00499 593 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 POLR3DP05423 398 aaPredicted RBP21.04■□□□□ 0.96
GNE-201ENST00000377902 FDPSP14324 419 aaKnown RBP21.04■□□□□ 0.96
GNE-201ENST00000377902 DPCR1Q3MIW9 517 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 FMNL2Q96PY5 1086 aa21.04■□□□□ 0.96
GNE-201ENST00000377902 ZC3H6P61129 1189 aaKnown RBP21.03■□□□□ 0.96
GNE-201ENST00000377902 SLC52A2Q9HAB3 445 aa21.03■□□□□ 0.96
GNE-201ENST00000377902 CLIC4Q9Y696 253 aa21.03■□□□□ 0.96
GNE-201ENST00000377902 C5P01031 1676 aa21.03■□□□□ 0.96
GNE-201ENST00000377902 KIF20AO95235 890 aa21.03■□□□□ 0.96
GNE-201ENST00000377902 HSPD1P10809 573 aaKnown RBP21.03■□□□□ 0.96
GNE-201ENST00000377902 ZNF771Q7L3S4 317 aaPredicted RBP21.03■□□□□ 0.96
GNE-201ENST00000377902 FMR1NBQ8N0W7 255 aaPredicted RBP21.03■□□□□ 0.96
GNE-201ENST00000377902 TAOK2Q9UL54 1235 aa21.03■□□□□ 0.96
GNE-201ENST00000377902 SALL1Q9NSC2 1324 aa21.03■□□□□ 0.96
GNE-201ENST00000377902 ISM2Q6H9L7 571 aa21.02■□□□□ 0.96
GNE-201ENST00000377902 CEP57L1Q8IYX8 460 aa21.02■□□□□ 0.96
GNE-201ENST00000377902 LRRN4CLQ8ND94 238 aa21.02■□□□□ 0.96
GNE-201ENST00000377902 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.96
GNE-201ENST00000377902 PAG1Q9NWQ8 432 aa21.02■□□□□ 0.96
GNE-201ENST00000377902 ERBB3P21860 1342 aa21.02■□□□□ 0.96
GNE-201ENST00000377902 RABL6Q3YEC7 729 aaPredicted RBP21.02■□□□□ 0.96
GNE-201ENST00000377902 FBXO38Q6PIJ6 1188 aa21.02■□□□□ 0.96
GNE-201ENST00000377902 CARMIL3Q8ND23 1372 aa21.01■□□□□ 0.95
GNE-201ENST00000377902 SIPA1L3O60292 1781 aaPredicted RBP21.01■□□□□ 0.95
GNE-201ENST00000377902 NEMFO60524 1076 aa21.01■□□□□ 0.95
GNE-201ENST00000377902 HMGB1P09429 215 aaKnown RBP21.01■□□□□ 0.95
GNE-201ENST00000377902 MORC2Q9Y6X9 1032 aaPredicted RBP21.01■□□□□ 0.95
GNE-201ENST00000377902 SH3TC1Q8TE82 1336 aa21.01■□□□□ 0.95
GNE-201ENST00000377902 MYH15Q9Y2K3 1946 aa21.01■□□□□ 0.95
GNE-201ENST00000377902 HAND2P61296 217 aa21■□□□□ 0.95
GNE-201ENST00000377902 E4F1Q66K89 784 aaPredicted RBP21■□□□□ 0.95
GNE-201ENST00000377902 MRPS27Q92552 414 aaKnown RBP21■□□□□ 0.95
GNE-201ENST00000377902 XPO4Q9C0E2 1151 aaKnown RBP21■□□□□ 0.95
GNE-201ENST00000377902 KDM6AO15550 1401 aaPredicted RBP21■□□□□ 0.95
GNE-201ENST00000377902 SMC2O95347 1197 aa21■□□□□ 0.95
GNE-201ENST00000377902 ZNF594Q96JF6 807 aaPredicted RBP21■□□□□ 0.95
GNE-201ENST00000377902 AGXT2Q9BYV1 514 aa21■□□□□ 0.95
GNE-201ENST00000377902 ST7Q9NRC1 585 aa21■□□□□ 0.95
GNE-201ENST00000377902 IFNKQ9P0W0 207 aa21■□□□□ 0.95
GNE-201ENST00000377902 OVOS2A0A0G2JMS6 1433 aa21■□□□□ 0.95
GNE-201ENST00000377902 ARMCX5Q6P1M9 558 aa20.99■□□□□ 0.95
GNE-201ENST00000377902 ATG9AQ7Z3C6 839 aa20.99■□□□□ 0.95
GNE-201ENST00000377902 TMC6Q7Z403 805 aa20.99■□□□□ 0.95
GNE-201ENST00000377902 MAST3O60307 1309 aa20.99■□□□□ 0.95
GNE-201ENST00000377902 M0R2C6 588 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 NLRP2Q9NX02 1062 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 SLFN14P0C7P3 912 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 CASP7P55210 303 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 LRRC24Q50LG9 513 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 ZMYM1Q5SVZ6 1142 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 ZNF397Q8NF99 534 aaPredicted RBP20.98■□□□□ 0.95
GNE-201ENST00000377902 DSCC1Q9BVC3 393 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 NEDD4P46934 1319 aa20.98■□□□□ 0.95
GNE-201ENST00000377902 SF3A1Q15459 793 aaKnown RBP20.97■□□□□ 0.95
GNE-201ENST00000377902 PTPN21Q16825 1174 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 HSP90AB3PQ58FF7 597 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 ADALQ6DHV7 355 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 LINC00301Q8NCQ3 95 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 KIAA1468Q9P260 1216 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 FOXO4P98177 505 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 SYT10Q6XYQ8 523 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 HELLSQ9NRZ9 838 aa20.97■□□□□ 0.95
GNE-201ENST00000377902 PHKG2P15735 406 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 STK38Q15208 465 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 RAPGEF4Q8WZA2 1011 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 NAT10Q9H0A0 1025 aaKnown RBP20.96■□□□□ 0.95
GNE-201ENST00000377902 RTEL1Q9NZ71 1219 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 RFX7Q2KHR2 1363 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 ERCC6LQ2NKX8 1250 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 ERO1AQ96HE7 468 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 PPP1R13BQ96KQ4 1090 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 ZNF446Q9NWS9 450 aa20.96■□□□□ 0.95
GNE-201ENST00000377902 PALLDQ8WX93 1383 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms