RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 NYXQ9GZU5 481 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 PCDHB15Q9Y5E8 787 aa21.6■■□□□ 1.05
TBC1D4-201ENST00000377625 F13A1P00488 732 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 DZIP3Q86Y13 1208 aaKnown RBP21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 VTI1AQ96AJ9 217 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 SPDYE3A6NKU9 549 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 GNAT2P19087 354 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 LRRC45Q96CN5 670 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 RRP36Q96EU6 259 aaKnown RBP21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 TTC12Q9H892 705 aaPredicted RBP21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 RTL9Q8NET4 1388 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 PPIP5K1Q6PFW1 1433 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 PRPHP41219 470 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 DDB1Q16531 1140 aa21.59■■□□□ 1.05
TBC1D4-201ENST00000377625 DNM1Q05193 864 aaKnown RBP21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 DNAI1Q9UI46 699 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 RASAL2Q9UJF2 1139 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 CALML3P27482 149 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 KRT79Q5XKE5 535 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 SIRT1Q96EB6 747 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 ZNF830Q96NB3 372 aaPredicted RBP21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 DNAJC25Q9H1X3 360 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 VEZTQ9HBM0 779 aa21.58■■□□□ 1.05
TBC1D4-201ENST00000377625 SPTLC2O15270 562 aa21.58■■□□□ 1.04
TBC1D4-201ENST00000377625 IQCGQ9H095 443 aaKnown RBP21.58■■□□□ 1.04
TBC1D4-201ENST00000377625 RNF113AO15541 343 aaKnown RBP21.58■■□□□ 1.04
TBC1D4-201ENST00000377625 PRIMPOLQ96LW4 560 aa21.58■■□□□ 1.04
TBC1D4-201ENST00000377625 CCDC186Q7Z3E2 898 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 TTC16Q8NEE8 873 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 SREK1Q8WXA9 508 aaKnown RBP21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 MCM9Q9NXL9 1143 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 RTL1A6NKG5 1358 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 TACC1O75410 805 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 C16orf71Q8IYS4 520 aaPredicted RBP21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 ARID5AQ03989 594 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 PLS1Q14651 629 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 TNNI2P48788 182 aa21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 EIF4A2Q14240 407 aaKnown RBP21.57■■□□□ 1.04
TBC1D4-201ENST00000377625 ZC3H12CQ9C0D7 883 aaKnown RBP21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 MIGA1Q8NAN2 632 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 LINS1Q8NG48 757 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 GRIN2AQ12879 1464 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 KRT2P35908 639 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 GJC1P36383 396 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 TPTE2Q6XPS3 522 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 TTC41PQ6P2S7 1318 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 SYT1P21579 422 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 MAGEB6Q8N7X4 407 aa21.56■■□□□ 1.04
TBC1D4-201ENST00000377625 CHST3Q7LGC8 479 aa21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 FAM13AO94988 1023 aa21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 PLCG2P16885 1265 aa21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 CLEC11AQ9Y240 323 aa21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 CUL7Q14999 1698 aa21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 PAIP2Q9BPZ3 127 aaKnown RBP21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 MTHFSDQ2M296 383 aaKnown RBP21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 NFATC2IPQ8NCF5 419 aa21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 HELBQ8NG08 1087 aaPredicted RBP21.55■■□□□ 1.04
TBC1D4-201ENST00000377625 IRS4O14654 1257 aaPredicted RBP21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 EEF2P13639 858 aaKnown RBP21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 FBF1Q8TES7 1133 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 LMBR1Q8WVP7 490 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 LRRC59Q96AG4 307 aaKnown RBP21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 CCDC77Q9BR77 488 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 NSFL1CQ9UNZ2 370 aaKnown RBP21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 B4DLN1 442 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 IL2RBP14784 551 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 MRPL12P52815 198 aaKnown RBP21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 GRM1Q13255 1194 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 ATP2C2O75185 946 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 C8orf37Q96NL8 207 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 SERPINA10Q9UK55 444 aa21.54■■□□□ 1.04
TBC1D4-201ENST00000377625 TMEM110-MUSTN1A8MSY1 372 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 ARL1P40616 181 aaPredicted RBP21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 APOBRQ0VD83 1088 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 GSTA5Q7RTV2 222 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 LMOD1P29536 600 aaPredicted RBP21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 KRT83P78385 493 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 MAP3K9P80192 1104 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 DPH6Q7L8W6 267 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 FAM212AQ96EL1 285 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 DYNC1I1O14576 645 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 NCBP1Q09161 790 aaKnown RBP21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 ARFGAP3Q9NP61 516 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 BICDL2A1A5D9 508 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 MCM7P33993 719 aa21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 CWF19L2Q2TBE0 894 aaKnown RBP21.53■■□□□ 1.04
TBC1D4-201ENST00000377625 KDM5BQ9UGL1 1544 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 KIF5AQ12840 1032 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 TFCP2Q12800 502 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 HS2ST1Q7LGA3 356 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 OTUD6BQ8N6M0 293 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 RTCBQ9Y3I0 505 aaKnown RBP21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 TOM1O60784 492 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 NOLC1Q14978 699 aaKnown RBP eCLIP21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 CCDC42Q96M95 316 aa21.52■■□□□ 1.04
TBC1D4-201ENST00000377625 ASXL1Q8IXJ9 1541 aa21.52■■□□□ 1.03
TBC1D4-201ENST00000377625 CTAGE9A4FU28 777 aa21.52■■□□□ 1.03
TBC1D4-201ENST00000377625 MRPS9P82933 396 aaKnown RBP21.52■■□□□ 1.03
TBC1D4-201ENST00000377625 KRT86O43790 486 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms