RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 ARID4AP29374 1257 aaPredicted RBP20.87■□□□□ 0.93
NKX2-2-201ENST00000377142 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
NKX2-2-201ENST00000377142 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
NKX2-2-201ENST00000377142 LARP6Q9BRS8 491 aaKnown RBP20.87■□□□□ 0.93
NKX2-2-201ENST00000377142 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.87■□□□□ 0.93
NKX2-2-201ENST00000377142 SLC5A1P13866 664 aa20.86■□□□□ 0.93
NKX2-2-201ENST00000377142 APPBP2Q92624 585 aa20.86■□□□□ 0.93
NKX2-2-201ENST00000377142 AFF2P51816 1311 aa20.86■□□□□ 0.93
NKX2-2-201ENST00000377142 M0R2C6 588 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 RPS6KA4O75676 772 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 SLFNL1Q499Z3 407 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 ZSCAN25Q6NSZ9 544 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 GZF1Q9H116 711 aaPredicted RBP20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 SEC31BQ9NQW1 1179 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 ME3Q16798 604 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 KLHL40Q2TBA0 621 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 CCDC102BQ68D86 513 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 OSBP2Q969R2 916 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 TPCN1Q9ULQ1 816 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 A0A1B0GUL6 1792 aa20.85■□□□□ 0.93
NKX2-2-201ENST00000377142 HMGB1P09429 215 aaKnown RBP20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 KCNQ4P56696 695 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 CCNL1Q9UK58 526 aaPredicted RBP20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 DOCK2Q92608 1830 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 HSPA1LP34931 641 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 WASHC4Q2M389 1173 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 PI16Q6UXB8 463 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 LMBRD1Q9NUN5 540 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 NARFQ9UHQ1 456 aa20.84■□□□□ 0.93
NKX2-2-201ENST00000377142 PHKA1P46020 1223 aa20.83■□□□□ 0.93
NKX2-2-201ENST00000377142 TOB2Q14106 344 aaPredicted RBP20.83■□□□□ 0.93
NKX2-2-201ENST00000377142 L1TD1Q5T7N2 865 aaKnown RBP20.83■□□□□ 0.93
NKX2-2-201ENST00000377142 ONECUT3O60422 494 aaPredicted RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 TRPC5Q9UL62 973 aaPredicted RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 DDX49Q9Y6V7 483 aaKnown RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 C4BP0C0L5 1744 aa20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 ST3GAL1Q11201 340 aa20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 COL9A3Q14050 684 aaPredicted RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 FOXD4L5Q5VV16 416 aaPredicted RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 HELBQ8NG08 1087 aaPredicted RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 FOXD4L4Q8WXT5 416 aaPredicted RBP20.82■□□□□ 0.92
NKX2-2-201ENST00000377142 MYO5AQ9Y4I1 1855 aaKnown RBP20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 GNPATO15228 680 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 SF3B3Q15393 1217 aaKnown RBP20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 ERFEQ4G0M1 354 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 TCEANC2Q96MN5 208 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 NYXQ9GZU5 481 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 CTNNA3Q9UI47 895 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 STX6O43752 255 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 PDIA4P13667 645 aaKnown RBP20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 GJB2P29033 226 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 ADD2P35612 726 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 RTCBQ9Y3I0 505 aaKnown RBP20.81■□□□□ 0.92
NKX2-2-201ENST00000377142 FAM182BQ5T319 152 aa20.8■□□□□ 0.92
NKX2-2-201ENST00000377142 TBC1D9BQ66K14 1250 aa20.8■□□□□ 0.92
NKX2-2-201ENST00000377142 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
NKX2-2-201ENST00000377142 FSD2A1L4K1 749 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 GOLGA6L3A6NEY3 463 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 ZPR1O75312 459 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 SYT1P21579 422 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 KCNA4P22459 653 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 ZSCAN22P10073 491 aaPredicted RBP20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 UBE3CQ15386 1083 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 SLC10A5Q5PT55 438 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 NECAB1Q8N987 351 aa20.79■□□□□ 0.92
NKX2-2-201ENST00000377142 CHRNDQ07001 517 aa20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 Q6ZUG5 572 aa20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 DHX32Q7L7V1 743 aaKnown RBP20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 ANKRD18AQ8IVF6 992 aa20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 COL4A1P02462 1669 aa20.78■□□□□ 0.92
NKX2-2-201ENST00000377142 E7EWF7 191 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 GPAA1O43292 621 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 SLC9C2Q5TAH2 1124 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 SPATA5Q8NB90 893 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 SETDB2Q96T68 719 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 IMMTQ16891 758 aaKnown RBP20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 BICDL1Q6ZP65 573 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 ATP6V1DQ9Y5K8 247 aa20.77■□□□□ 0.92
NKX2-2-201ENST00000377142 FOXP2O15409 715 aa20.76■□□□□ 0.91
NKX2-2-201ENST00000377142 IDH1O75874 414 aaKnown RBP20.76■□□□□ 0.91
NKX2-2-201ENST00000377142 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
NKX2-2-201ENST00000377142 RASGRF1Q13972 1273 aa20.76■□□□□ 0.91
NKX2-2-201ENST00000377142 F13A1P00488 732 aa20.75■□□□□ 0.91
NKX2-2-201ENST00000377142 PDE6AP16499 860 aa20.75■□□□□ 0.91
NKX2-2-201ENST00000377142 PDCP20941 246 aa20.75■□□□□ 0.91
NKX2-2-201ENST00000377142 FGD1P98174 961 aa20.75■□□□□ 0.91
NKX2-2-201ENST00000377142 GTF3C6Q969F1 213 aa20.75■□□□□ 0.91
NKX2-2-201ENST00000377142 BSDC1Q9NW68 430 aaPredicted RBP20.75■□□□□ 0.91
NKX2-2-201ENST00000377142 MBD3O95983 291 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms