RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 MINPP1Q9UNW1 487 aa12.78□□□□□ -0.36
PDPN-203ENST00000376061 CDC45O75419 566 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 TAF5LO75529 589 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 SRGNP10124 158 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 MYH7P12883 1935 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 ATP5JP18859 108 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 PDE6BP35913 854 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 SLC51AQ86UW1 340 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 LPIN2Q92539 896 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 XAGE2Q96GT9 111 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
PDPN-203ENST00000376061 SNAP23O00161 211 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 ZBTB7AO95365 584 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
PDPN-203ENST00000376061 SLC5A1P13866 664 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 NPR1P16066 1061 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 TBC1D9Q6ZT07 1266 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
PDPN-203ENST00000376061 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
PDPN-203ENST00000376061 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
PDPN-203ENST00000376061 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
PDPN-203ENST00000376061 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
PDPN-203ENST00000376061 BOLA2Q9H3K6 86 aa12.75□□□□□ -0.37
PDPN-203ENST00000376061 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
PDPN-203ENST00000376061 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
PDPN-203ENST00000376061 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
PDPN-203ENST00000376061 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
PDPN-203ENST00000376061 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
PDPN-203ENST00000376061 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
PDPN-203ENST00000376061 CNTROBQ8N137 903 aa12.74□□□□□ -0.37
PDPN-203ENST00000376061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDPN-203ENST00000376061 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
PDPN-203ENST00000376061 MASTLQ96GX5 879 aa12.74□□□□□ -0.37
PDPN-203ENST00000376061 HAUS7Q99871 368 aa12.74□□□□□ -0.37
PDPN-203ENST00000376061 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
PDPN-203ENST00000376061 WTIPA6NIX2 430 aaPredicted RBP12.73□□□□□ -0.37
PDPN-203ENST00000376061 BBOX1O75936 387 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 SEC24BO95487 1268 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 PHKA1P46020 1223 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 UBE4AQ14139 1066 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 SCARF1Q14162 830 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 CCDC158Q5M9N0 1113 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 TTC39AQ5SRH9 613 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 STYK1Q6J9G0 422 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 TMC4Q7Z404 712 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 RFX7Q2KHR2 1363 aa12.73□□□□□ -0.37
PDPN-203ENST00000376061 XDHP47989 1333 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 H0YIN7 160 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
PDPN-203ENST00000376061 CHRNA5P30532 468 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
PDPN-203ENST00000376061 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
PDPN-203ENST00000376061 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
PDPN-203ENST00000376061 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 ZNF804BA4D1E1 1349 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 IRS2Q9Y4H2 1338 aa12.72□□□□□ -0.37
PDPN-203ENST00000376061 KLRK1P26718 216 aa12.71□□□□□ -0.37
PDPN-203ENST00000376061 POLD1P28340 1107 aa12.71□□□□□ -0.37
PDPN-203ENST00000376061 KCNJ4P48050 445 aa12.71□□□□□ -0.37
PDPN-203ENST00000376061 GPSM2P81274 684 aa12.71□□□□□ -0.37
PDPN-203ENST00000376061 ATP6V0A2Q9Y487 856 aa12.71□□□□□ -0.37
PDPN-203ENST00000376061 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.37
PDPN-203ENST00000376061 UQCRFS1P1P0C7P4 283 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 CHMLP26374 656 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 MCAMP43121 646 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 ZNF622Q969S3 477 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDPN-203ENST00000376061 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 PAG1Q9NWQ8 432 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 MAST2Q6P0Q8 1798 aa12.7□□□□□ -0.38
PDPN-203ENST00000376061 GOLIM4O00461 696 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 GYG1P46976 350 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 BCAMP50895 628 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
PDPN-203ENST00000376061 PI16Q6UXB8 463 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 FSD1Q9BTV5 496 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 UFL1O94874 794 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 PTGER2P43116 358 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 ZAP70P43403 619 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
PDPN-203ENST00000376061 RASGRF1Q13972 1273 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 ESYT1Q9BSJ8 1104 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
PDPN-203ENST00000376061 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms