RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 PES1O00541 588 aaKnown RBP13.76□□□□□ -0.21
MCF2L-202ENST00000375597 STX1AQ16623 288 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
MCF2L-202ENST00000375597 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
MCF2L-202ENST00000375597 CDK11BP21127 795 aaKnown RBP13.75□□□□□ -0.21
MCF2L-202ENST00000375597 ADORA1P30542 326 aa13.75□□□□□ -0.21
MCF2L-202ENST00000375597 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
MCF2L-202ENST00000375597 RESTQ13127 1097 aa13.75□□□□□ -0.21
MCF2L-202ENST00000375597 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
MCF2L-202ENST00000375597 AOX1Q06278 1338 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 SFPQP23246 707 aaKnown RBP eCLIP13.74□□□□□ -0.21
MCF2L-202ENST00000375597 SNW1Q13573 536 aaKnown RBP13.74□□□□□ -0.21
MCF2L-202ENST00000375597 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
MCF2L-202ENST00000375597 SPTLC3Q9NUV7 552 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 DMTNQ08495 405 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 TTC39AQ5SRH9 613 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 TRMT44Q8IYL2 757 aaKnown RBP13.74□□□□□ -0.21
MCF2L-202ENST00000375597 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
MCF2L-202ENST00000375597 MNS1Q8NEH6 495 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 FAM89AQ96GI7 184 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
MCF2L-202ENST00000375597 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 22.9
MCF2L-202ENST00000375597 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
MCF2L-202ENST00000375597 NSUN7Q8NE18 718 aaKnown RBP13.73□□□□□ -0.21
MCF2L-202ENST00000375597 NRXN3Q9Y4C0 1643 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 E7EWF7 191 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 SLC3A2P08195 630 aaKnown RBP13.73□□□□□ -0.21
MCF2L-202ENST00000375597 ADD1P35611 737 aaKnown RBP13.73□□□□□ -0.21
MCF2L-202ENST00000375597 PTPN12Q05209 780 aaKnown RBP13.73□□□□□ -0.21
MCF2L-202ENST00000375597 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 TEX35Q5T0J7 233 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 FBXO38Q6PIJ6 1188 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 KIF18AQ8NI77 898 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 NUP133Q8WUM0 1156 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 UTP14AQ9BVJ6 771 aaKnown RBP13.73□□□□□ -0.21
MCF2L-202ENST00000375597 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
MCF2L-202ENST00000375597 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 SEC31AO94979 1220 aaKnown RBP13.72□□□□□ -0.21
MCF2L-202ENST00000375597 TPM3P06753 285 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 GYS2P54840 703 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
MCF2L-202ENST00000375597 ZNF396Q96N95 335 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-202ENST00000375597 TM6SF1Q9BZW5 370 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-202ENST00000375597 COL15A1P39059 1388 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 C3P01024 1663 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 TATP17735 454 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-202ENST00000375597 PNOCQ13519 176 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 GRAMD1CQ8IYS0 662 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 STAMQ92783 540 aa13.72□□□□□ -0.21
MCF2L-202ENST00000375597 M0R2C6 588 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 PRC1O43663 620 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 STX17P56962 302 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 KMT5BQ4FZB7 885 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 ARHGAP29Q52LW3 1261 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 MRPS27Q92552 414 aaKnown RBP13.71□□□□□ -0.21
MCF2L-202ENST00000375597 DESI2Q9BSY9 194 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 TULP1O00294 542 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-202ENST00000375597 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 PPARDQ03181 441 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 KRT32Q14532 448 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-202ENST00000375597 HDAC5Q9UQL6 1122 aa13.71□□□□□ -0.21
MCF2L-202ENST00000375597 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
MCF2L-202ENST00000375597 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 KDRP35968 1356 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 NRDCO43847 1150 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 EEF2KMTQ96G04 330 aa13.7□□□□□ -0.22
MCF2L-202ENST00000375597 NAT10Q9H0A0 1025 aaKnown RBP13.7□□□□□ -0.22
MCF2L-202ENST00000375597 ZCCHC17Q9NP64 241 aaKnown RBP13.7□□□□□ -0.22
MCF2L-202ENST00000375597 ZNF609O15014 1411 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 FOXN1O15353 648 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 PDIA3P30101 505 aaKnown RBP13.69□□□□□ -0.22
MCF2L-202ENST00000375597 FAM160A1Q05DH4 1040 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 SCARF1Q14162 830 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 PLA2G4DQ86XP0 818 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 SPTLC2O15270 562 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 CASP1P29466 404 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 TRDNQ13061 729 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 CCDC57Q2TAC2 916 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
MCF2L-202ENST00000375597 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-202ENST00000375597 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 PEAK1Q9H792 1746 aa13.69□□□□□ -0.22
MCF2L-202ENST00000375597 B4E1Z4 1266 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 ZAP70P43403 619 aa13.68□□□□□ -0.22
MCF2L-202ENST00000375597 ADKP55263 362 aaKnown RBP13.68□□□□□ -0.22
MCF2L-202ENST00000375597 DPF2Q92785 391 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms