RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.03■□□□□ 0.8
PHF1-202ENST00000374516 SLC27A2O14975 620 aa20.02■□□□□ 0.8
PHF1-202ENST00000374516 TAF5LO75529 589 aa20.02■□□□□ 0.8
PHF1-202ENST00000374516 GORABQ5T7V8 394 aa20.02■□□□□ 0.8
PHF1-202ENST00000374516 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
PHF1-202ENST00000374516 KBTBD3Q8NAB2 608 aa20.02■□□□□ 0.8
PHF1-202ENST00000374516 PTF1AQ7RTS3 328 aa20.02■□□□□ 0.79
PHF1-202ENST00000374516 KLHL34Q8N239 644 aa20.02■□□□□ 0.79
PHF1-202ENST00000374516 KCNB2Q92953 911 aa20.02■□□□□ 0.79
PHF1-202ENST00000374516 FUCA2Q9BTY2 467 aa20.02■□□□□ 0.79
PHF1-202ENST00000374516 ATP6V1DQ9Y5K8 247 aa20.02■□□□□ 0.79
PHF1-202ENST00000374516 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 F13A1P00488 732 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 FKBP4Q02790 459 aaKnown RBP eCLIP20.01■□□□□ 0.79
PHF1-202ENST00000374516 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 XAGE2Q96GT9 111 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 TCHHQ07283 1943 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 ZSWIM6Q9HCJ5 1215 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 PDRG1Q9NUG6 133 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 KIF3AQ9Y496 699 aa20.01■□□□□ 0.79
PHF1-202ENST00000374516 NWD2Q9ULI1 1742 aa20■□□□□ 0.79
PHF1-202ENST00000374516 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
PHF1-202ENST00000374516 PDE8AO60658 829 aa20■□□□□ 0.79
PHF1-202ENST00000374516 DTNBO60941 627 aa20■□□□□ 0.79
PHF1-202ENST00000374516 VPS72Q15906 364 aa20■□□□□ 0.79
PHF1-202ENST00000374516 METTL24Q5JXM2 366 aa20■□□□□ 0.79
PHF1-202ENST00000374516 GIMAP6Q6P9H5 292 aa20■□□□□ 0.79
PHF1-202ENST00000374516 SMC3Q9UQE7 1217 aa20■□□□□ 0.79
PHF1-202ENST00000374516 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
PHF1-202ENST00000374516 RIPOR2Q9Y4F9 1068 aa20■□□□□ 0.79
PHF1-202ENST00000374516 CYP46A1Q9Y6A2 500 aa20■□□□□ 0.79
PHF1-202ENST00000374516 NUP98P52948 1817 aa20■□□□□ 0.79
PHF1-202ENST00000374516 FIBPO43427 364 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 CNNM1Q9NRU3 951 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 FBXO3Q9UK99 471 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 PLCB2Q00722 1185 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 CCDC158Q5M9N0 1113 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 FAM182BQ5T319 152 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 TCEANC2Q96MN5 208 aa19.99■□□□□ 0.79
PHF1-202ENST00000374516 CAMTA2O94983 1202 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 LARGE1O95461 756 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 TTC39AQ5SRH9 613 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 TM6SF1Q9BZW5 370 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 PRDM10Q9NQV6 1147 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 JCADQ9P266 1359 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 RNF20Q5VTR2 975 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 KIAA1524Q8TCG1 905 aa19.98■□□□□ 0.79
PHF1-202ENST00000374516 AP5Z1O43299 807 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 SCARF1Q14162 830 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 VPS53Q5VIR6 699 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
PHF1-202ENST00000374516 ATP2B3Q16720 1220 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 PI16Q6UXB8 463 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 USP21Q9UK80 565 aa19.97■□□□□ 0.79
PHF1-202ENST00000374516 MYH14Q7Z406 1995 aaKnown RBP19.96■□□□□ 0.79
PHF1-202ENST00000374516 NIP7Q9Y221 180 aaKnown RBP eCLIP19.96■□□□□ 0.79
PHF1-202ENST00000374516 SH3TC1Q8TE82 1336 aa19.96■□□□□ 0.79
PHF1-202ENST00000374516 DNM1Q05193 864 aaKnown RBP19.96■□□□□ 0.79
PHF1-202ENST00000374516 FNBP4Q8N3X1 1017 aaPredicted RBP19.96■□□□□ 0.79
PHF1-202ENST00000374516 UTP14AQ9BVJ6 771 aaKnown RBP19.96■□□□□ 0.79
PHF1-202ENST00000374516 TPM3P06753 285 aa19.95■□□□□ 0.78
PHF1-202ENST00000374516 ZSCAN20P17040 1043 aaPredicted RBP19.95■□□□□ 0.78
PHF1-202ENST00000374516 RIC1Q4ADV7 1423 aa19.95■□□□□ 0.78
PHF1-202ENST00000374516 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
PHF1-202ENST00000374516 HELBQ8NG08 1087 aaPredicted RBP19.95■□□□□ 0.78
PHF1-202ENST00000374516 RFX7Q2KHR2 1363 aa19.95■□□□□ 0.78
PHF1-202ENST00000374516 ANKRD36CQ5JPF3 1778 aa19.95■□□□□ 0.78
PHF1-202ENST00000374516 KCNF1Q9H3M0 494 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 MTMR6Q9Y217 621 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 PSMA5P28066 241 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 GJB2P29033 226 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 BLOC1S2Q6QNY1 142 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 BCL2L12Q9HB09 334 aa19.94■□□□□ 0.78
PHF1-202ENST00000374516 ZAP70P43403 619 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 DMTNQ08495 405 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 UTP14CQ5TAP6 766 aaKnown RBP19.93■□□□□ 0.78
PHF1-202ENST00000374516 CCDC83Q8IWF9 413 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 SEC31BQ9NQW1 1179 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 PYCARDQ9ULZ3 195 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 PPP4R3BQ5MIZ7 849 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 ZMYM1Q5SVZ6 1142 aa19.93■□□□□ 0.78
PHF1-202ENST00000374516 RNF113AO15541 343 aaKnown RBP19.92■□□□□ 0.78
PHF1-202ENST00000374516 PDE8BO95263 885 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 CYP21A2P08686 494 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 ME3Q16798 604 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 VGLL2Q8N8G2 317 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 NECAB1Q8N987 351 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.92■□□□□ 0.78
PHF1-202ENST00000374516 HELLSQ9NRZ9 838 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 HMG20BQ9P0W2 317 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 TPCN1Q9ULQ1 816 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 SNAP23O00161 211 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 CBX1P83916 185 aa19.92■□□□□ 0.78
PHF1-202ENST00000374516 U3KPZ7 1027 aaPredicted RBP19.92■□□□□ 0.78
PHF1-202ENST00000374516 CCDC192P0DO97 292 aa19.91■□□□□ 0.78
PHF1-202ENST00000374516 SPC24Q8NBT2 197 aa19.91■□□□□ 0.78
PHF1-202ENST00000374516 RPS6KB1P23443 525 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms