RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CWC25Q9NXE8 425 aaPredicted RBP21.07■□□□□ 0.96
PHF1-201ENST00000374512 LAMA4Q16363 1823 aa21.07■□□□□ 0.96
PHF1-201ENST00000374512 CTIFO43310 598 aaKnown RBP21.06■□□□□ 0.96
PHF1-201ENST00000374512 NEMFO60524 1076 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 IL2RBP14784 551 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 NKX1-1Q15270 411 aaPredicted RBP21.06■□□□□ 0.96
PHF1-201ENST00000374512 CCDC129Q6ZRS4 1044 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 FBXL16Q8N461 479 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 SEC62Q99442 399 aaKnown RBP21.06■□□□□ 0.96
PHF1-201ENST00000374512 ZSCAN25Q6NSZ9 544 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 DDX46Q7L014 1031 aaKnown RBP21.06■□□□□ 0.96
PHF1-201ENST00000374512 ZNF274Q96GC6 653 aaPredicted RBP21.06■□□□□ 0.96
PHF1-201ENST00000374512 DNAJC25Q9H1X3 360 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 PAG1Q9NWQ8 432 aa21.06■□□□□ 0.96
PHF1-201ENST00000374512 GOLGA6L19H0YKK7 550 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 IL15P40933 162 aaPredicted RBP21.05■□□□□ 0.96
PHF1-201ENST00000374512 STX1AQ16623 288 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 ZMYM1Q5SVZ6 1142 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 MRFAP1L1Q96HT8 127 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 NDUFB9Q9Y6M9 179 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 RIOK3O14730 519 aaKnown RBP21.05■□□□□ 0.96
PHF1-201ENST00000374512 SYCP1Q15431 976 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 STOX1Q6ZVD7 989 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 DDX11Q96FC9 970 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 BCL2L12Q9HB09 334 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 TJP1Q07157 1748 aa21.05■□□□□ 0.96
PHF1-201ENST00000374512 PAPPAQ13219 1627 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 IQCB1Q15051 598 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 CCDC73Q6ZRK6 1079 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 TTLL7Q6ZT98 887 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.04■□□□□ 0.96
PHF1-201ENST00000374512 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 ATG3Q9NT62 314 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 KCPQ6ZWJ8 1503 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 SALL1Q9NSC2 1324 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 PTPDC1A2A3K4 754 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 CLIP2Q9UDT6 1046 aa21.04■□□□□ 0.96
PHF1-201ENST00000374512 LRRFIP1Q32MZ4 808 aaKnown RBP21.03■□□□□ 0.96
PHF1-201ENST00000374512 ATG9AQ7Z3C6 839 aa21.03■□□□□ 0.96
PHF1-201ENST00000374512 CCAR1Q8IX12 1150 aaKnown RBP21.03■□□□□ 0.96
PHF1-201ENST00000374512 CCDC191Q8NCU4 936 aa21.03■□□□□ 0.96
PHF1-201ENST00000374512 PAXBP1Q9Y5B6 917 aa21.03■□□□□ 0.96
PHF1-201ENST00000374512 CTDNEP1O95476 244 aa21.02■□□□□ 0.96
PHF1-201ENST00000374512 FAM160A1Q05DH4 1040 aa21.02■□□□□ 0.96
PHF1-201ENST00000374512 ANKRD7Q92527 254 aa21.02■□□□□ 0.96
PHF1-201ENST00000374512 NEUROD6Q96NK8 337 aa21.02■□□□□ 0.96
PHF1-201ENST00000374512 SMTNL1A8MU46 457 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 GOLIM4O00461 696 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 KINO60870 393 aaKnown RBP21.01■□□□□ 0.95
PHF1-201ENST00000374512 CIAO1O76071 339 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 A1BGP04217 495 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 EVCP57679 992 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 PKNOX2Q96KN3 472 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 ANO10Q9NW15 660 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 E7EWF7 191 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 EVA1CP58658 441 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 STRN4Q9NRL3 753 aa21.01■□□□□ 0.95
PHF1-201ENST00000374512 RNF113AO15541 343 aaKnown RBP21■□□□□ 0.95
PHF1-201ENST00000374512 HSPD1P10809 573 aaKnown RBP21■□□□□ 0.95
PHF1-201ENST00000374512 APOBRQ0VD83 1088 aa21■□□□□ 0.95
PHF1-201ENST00000374512 SNW1Q13573 536 aaKnown RBP21■□□□□ 0.95
PHF1-201ENST00000374512 ENGASEQ8NFI3 743 aa21■□□□□ 0.95
PHF1-201ENST00000374512 CHGBP05060 677 aa21■□□□□ 0.95
PHF1-201ENST00000374512 RGS22Q8NE09 1264 aa21■□□□□ 0.95
PHF1-201ENST00000374512 LRRC2Q9BYS8 371 aa21■□□□□ 0.95
PHF1-201ENST00000374512 ZBTB3Q9H5J0 574 aa21■□□□□ 0.95
PHF1-201ENST00000374512 NRBP1Q9UHY1 535 aa21■□□□□ 0.95
PHF1-201ENST00000374512 EYA2O00167 538 aa20.99■□□□□ 0.95
PHF1-201ENST00000374512 PDIA3P30101 505 aaKnown RBP20.99■□□□□ 0.95
PHF1-201ENST00000374512 TSC1Q92574 1164 aa20.99■□□□□ 0.95
PHF1-201ENST00000374512 NAT10Q9H0A0 1025 aaKnown RBP20.99■□□□□ 0.95
PHF1-201ENST00000374512 CTNNA3Q9UI47 895 aa20.99■□□□□ 0.95
PHF1-201ENST00000374512 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
PHF1-201ENST00000374512 LRMPQ12912 555 aa20.98■□□□□ 0.95
PHF1-201ENST00000374512 PDCL2Q8N4E4 241 aa20.98■□□□□ 0.95
PHF1-201ENST00000374512 USP28Q96RU2 1077 aa20.98■□□□□ 0.95
PHF1-201ENST00000374512 CCDC9Q9Y3X0 531 aaKnown RBP20.98■□□□□ 0.95
PHF1-201ENST00000374512 TNS2Q63HR2 1409 aa20.98■□□□□ 0.95
PHF1-201ENST00000374512 TIMM10P62072 90 aa20.98■□□□□ 0.95
PHF1-201ENST00000374512 CACTINQ8WUQ7 758 aaKnown RBP20.98■□□□□ 0.95
PHF1-201ENST00000374512 FBXO3Q9UK99 471 aa20.98■□□□□ 0.95
PHF1-201ENST00000374512 A0A1W2PQ27 194 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 A0A1W2PQ64 194 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 A0A1W2PQD8 194 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 BECN2A8MW95 431 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 IFIT1P09914 478 aaKnown RBP20.97■□□□□ 0.95
PHF1-201ENST00000374512 LRRC8AQ8IWT6 810 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 RTEL1Q9NZ71 1219 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 MAST3O60307 1309 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 ZFYP08048 801 aaPredicted RBP20.97■□□□□ 0.95
PHF1-201ENST00000374512 CEP57L1Q8IYX8 460 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 GOLPH3LQ9H4A5 285 aa20.97■□□□□ 0.95
PHF1-201ENST00000374512 CARMIL3Q8ND23 1372 aa20.96■□□□□ 0.95
PHF1-201ENST00000374512 DHX16O60231 1041 aaKnown RBP20.96■□□□□ 0.95
PHF1-201ENST00000374512 TNNT1P13805 278 aa20.96■□□□□ 0.95
PHF1-201ENST00000374512 CEBPZQ03701 1054 aaKnown RBP20.96■□□□□ 0.95
PHF1-201ENST00000374512 ADALQ6DHV7 355 aa20.96■□□□□ 0.95
PHF1-201ENST00000374512 C11orf57Q6ZUT1 292 aaPredicted RBP20.96■□□□□ 0.95
PHF1-201ENST00000374512 ME1P48163 572 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms