RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 ZFYP08048 801 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-206ENST00000373198 CASC4Q6P4E1 433 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 ITIH3Q06033 890 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 ACSBG1Q96GR2 724 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 PYM1Q9BRP8 204 aaKnown RBP10.21□□□□□ -0.77
PTPRT-206ENST00000373198 TNNI2P48788 182 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 KANK3Q6NY19 840 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 UBLCP1Q8WVY7 318 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-206ENST00000373198 LRRC2Q9BYS8 371 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 BRD4O60885 1362 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-206ENST00000373198 OPA1O60313 960 aa10.21□□□□□ -0.77
PTPRT-206ENST00000373198 CYLC1P35663 651 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-206ENST00000373198 HGSO14964 777 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-206ENST00000373198 GJB2P29033 226 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 BIRC3Q13489 604 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 CCDC102BQ68D86 513 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 CPLX4Q7Z7G2 160 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 JAKMIP2Q96AA8 810 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 SLC8A3P57103 927 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 ATP6V1E1P36543 226 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 TAF7Q15545 349 aaPredicted RBP10.21□□□□□ -0.78
PTPRT-206ENST00000373198 C10orf67Q8IYJ2 551 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 PLIN2Q99541 437 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 NBPF1Q3BBV0 1214 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 RTN1Q16799 776 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 ERCC6LQ2NKX8 1250 aa10.21□□□□□ -0.78
PTPRT-206ENST00000373198 CASQ2O14958 399 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 PDE3AQ14432 1141 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 MAP3K2Q9Y2U5 619 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 MYH10P35580 1976 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 ANKRD30BQ9BXX2 1392 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 CTAGE9A4FU28 777 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 STK10O94804 968 aaKnown RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 GBP6Q6ZN66 633 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 IVLP07476 585 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 EXOC5O00471 708 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 IRAK4Q9NWZ3 460 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 PPP1R42Q7Z4L9 355 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 NEK11Q8NG66 645 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 TACC1O75410 805 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 SDCCAG8Q86SQ7 713 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 VPS18Q9P253 973 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 SUDS3Q9H7L9 328 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 CYP7A1P22680 504 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 TSTA3Q13630 321 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 PLCB4Q15147 1175 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 GKAP1Q5VSY0 366 aaPredicted RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 RSRC1Q96IZ7 334 aaKnown RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 STX10O60499 249 aa10.2□□□□□ -0.78
PTPRT-206ENST00000373198 DDX27Q96GQ7 796 aaKnown RBP10.2□□□□□ -0.78
PTPRT-206ENST00000373198 PDIA4P13667 645 aaKnown RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 INTS8Q75QN2 995 aaKnown RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 KCNA4P22459 653 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SSFA2P28290 1259 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 MARCKSP29966 332 aaPredicted RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 MCM7P33993 719 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 CLUL1Q15846 466 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 NOP56O00567 594 aaKnown RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 LDHAL6AQ6ZMR3 332 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 POLD1P28340 1107 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 CUX1P39880 1505 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 CAPN2P17655 700 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 BACH2Q9BYV9 841 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 ZNF131P52739 623 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 NCOA7Q8NI08 942 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SKA2Q8WVK7 121 aaPredicted RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 ZNF644Q9H582 1327 aaPredicted RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 ABL1P00519 1130 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 RAPGEF1Q13905 1077 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SETDB2Q96T68 719 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SAMD15Q9P1V8 674 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 F6X3S4 739 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 RIMBP2O15034 1052 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SETDB1Q15047 1291 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 LMBR1Q8WVP7 490 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 PSPC1Q8WXF1 523 aaKnown RBP10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SWAP70Q9UH65 585 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 RABGAP1Q9Y3P9 1069 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 MAN1A1P33908 653 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 TMTC4Q5T4D3 741 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 SLC4A4Q9Y6R1 1079 aa10.19□□□□□ -0.78
PTPRT-206ENST00000373198 AFAP1L2Q8N4X5 818 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 NAIPQ13075 1403 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 WDR44Q5JSH3 913 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 FAM200AQ8TCP9 573 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CTAGE15A4D2H0 777 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CTAGE8P0CG41 777 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CCDC152Q4G0S7 254 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 SEL1L2Q5TEA6 688 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CTAGE6Q86UF2 777 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 CTAGE4Q8IX94 777 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 FAM170AA1A519 330 aa10.18□□□□□ -0.78
PTPRT-206ENST00000373198 PPFIA1Q13136 1202 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms