RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ERO1AQ96HE7 468 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 SLIT3O75094 1523 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 PHRF1Q9P1Y6 1649 aaKnown RBP17.31■□□□□ 0.36
COL9A2-202ENST00000372748 TATP17735 454 aaPredicted RBP17.31■□□□□ 0.36
COL9A2-202ENST00000372748 TFCP2Q12800 502 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 LRRN4CLQ8ND94 238 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 DNAJC2Q99543 621 aaKnown RBP17.31■□□□□ 0.36
COL9A2-202ENST00000372748 SLU7O95391 586 aaKnown RBP17.3■□□□□ 0.36
COL9A2-202ENST00000372748 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 ZNF446Q9NWS9 450 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
COL9A2-202ENST00000372748 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 KRT32Q14532 448 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 NCOA5Q9HCD5 579 aaKnown RBP17.3■□□□□ 0.36
COL9A2-202ENST00000372748 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
COL9A2-202ENST00000372748 RCOR1Q9UKL0 485 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 SLFNL1Q499Z3 407 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 ANO10Q9NW15 660 aa17.3■□□□□ 0.36
COL9A2-202ENST00000372748 CTAGE5O15320 804 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 APOBRQ0VD83 1088 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 CEP57L1Q8IYX8 460 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 PTPDC1A2A3K4 754 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 STOX1Q6ZVD7 989 aa17.29■□□□□ 0.36
COL9A2-202ENST00000372748 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
COL9A2-202ENST00000372748 CTDNEP1O95476 244 aa17.28■□□□□ 0.36
COL9A2-202ENST00000372748 PTPN12Q05209 780 aaKnown RBP17.28■□□□□ 0.36
COL9A2-202ENST00000372748 FAM160A1Q05DH4 1040 aa17.28■□□□□ 0.36
COL9A2-202ENST00000372748 SYT10Q6XYQ8 523 aa17.28■□□□□ 0.36
COL9A2-202ENST00000372748 SDF4Q9BRK5 362 aa17.28■□□□□ 0.36
COL9A2-202ENST00000372748 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
COL9A2-202ENST00000372748 SMC2O95347 1197 aa17.28■□□□□ 0.36
COL9A2-202ENST00000372748 E4F1Q66K89 784 aaPredicted RBP17.28■□□□□ 0.36
COL9A2-202ENST00000372748 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
COL9A2-202ENST00000372748 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
COL9A2-202ENST00000372748 A0A1B0GVL5 298 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 TNNI3KQ59H18 835 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 CHST3Q7LGC8 479 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 FPGT-TNNI3KV9GXZ4 949 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 C5P01031 1676 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 A0A087WZG4 1122 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 TAF3Q5VWG9 929 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 SMARCC2Q8TAQ2 1214 aa17.27■□□□□ 0.36
COL9A2-202ENST00000372748 BIN1O00499 593 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 CYP27B1O15528 508 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
COL9A2-202ENST00000372748 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
COL9A2-202ENST00000372748 DPCR1Q3MIW9 517 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 TMC6Q7Z403 805 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 LRP10Q7Z4F1 713 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 XPO4Q9C0E2 1151 aaKnown RBP17.26■□□□□ 0.35
COL9A2-202ENST00000372748 JCADQ9P266 1359 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 ZNF609O15014 1411 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 MEGF6O75095 1541 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 BBXQ8WY36 941 aaPredicted RBP17.26■□□□□ 0.35
COL9A2-202ENST00000372748 PPP1R13BQ96KQ4 1090 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 IFNKQ9P0W0 207 aa17.26■□□□□ 0.35
COL9A2-202ENST00000372748 PFKFB2O60825 505 aa17.25■□□□□ 0.35
COL9A2-202ENST00000372748 ARMCX5Q6P1M9 558 aa17.25■□□□□ 0.35
COL9A2-202ENST00000372748 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
COL9A2-202ENST00000372748 PCDHA7Q9UN72 937 aa17.25■□□□□ 0.35
COL9A2-202ENST00000372748 U3KPZ7 1027 aaPredicted RBP17.25■□□□□ 0.35
COL9A2-202ENST00000372748 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
COL9A2-202ENST00000372748 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
COL9A2-202ENST00000372748 NAT10Q9H0A0 1025 aaKnown RBP17.25■□□□□ 0.35
COL9A2-202ENST00000372748 FAM53CQ9NYF3 392 aa17.25■□□□□ 0.35
COL9A2-202ENST00000372748 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
COL9A2-202ENST00000372748 GSDMDP57764 484 aa17.24■□□□□ 0.35
COL9A2-202ENST00000372748 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
COL9A2-202ENST00000372748 ATP5JP18859 108 aa17.24■□□□□ 0.35
COL9A2-202ENST00000372748 NDUFA8P51970 172 aa17.24■□□□□ 0.35
COL9A2-202ENST00000372748 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
COL9A2-202ENST00000372748 ZRSR1Q15695 479 aaKnown RBP17.23■□□□□ 0.35
COL9A2-202ENST00000372748 MCMDC2Q4G0Z9 681 aa17.23■□□□□ 0.35
COL9A2-202ENST00000372748 LMBR1LQ6UX01 489 aa17.23■□□□□ 0.35
COL9A2-202ENST00000372748 ZNF396Q96N95 335 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-202ENST00000372748 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
COL9A2-202ENST00000372748 CABP4P57796 275 aa17.23■□□□□ 0.35
COL9A2-202ENST00000372748 FMR1NBQ8N0W7 255 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-202ENST00000372748 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
COL9A2-202ENST00000372748 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-202ENST00000372748 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-202ENST00000372748 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL9A2-202ENST00000372748 CLCN6P51797 869 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
COL9A2-202ENST00000372748 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
COL9A2-202ENST00000372748 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
COL9A2-202ENST00000372748 ARHGAP29Q52LW3 1261 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 TMEM51Q9NW97 253 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms