RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 HELLSQ9NRZ9 838 aa21.73■■□□□ 1.07
CD40-202ENST00000372285 MYO5AQ9Y4I1 1855 aaKnown RBP21.73■■□□□ 1.07
CD40-202ENST00000372285 QSER1Q2KHR3 1735 aa21.73■■□□□ 1.07
CD40-202ENST00000372285 SNAP23O00161 211 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 RNF113AO15541 343 aaKnown RBP21.72■■□□□ 1.07
CD40-202ENST00000372285 CD2BP2O95400 341 aaKnown RBP21.72■■□□□ 1.07
CD40-202ENST00000372285 MCMDC2Q4G0Z9 681 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 ZMYM1Q5SVZ6 1142 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 NLGN1Q8N2Q7 840 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 IL27Q8NEV9 243 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 KCNB2Q92953 911 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 ZNF589Q86UQ0 364 aaPredicted RBP21.72■■□□□ 1.07
CD40-202ENST00000372285 CAMKK2Q96RR4 588 aa21.72■■□□□ 1.07
CD40-202ENST00000372285 DOCK2Q92608 1830 aa21.71■■□□□ 1.07
CD40-202ENST00000372285 ZFYP08048 801 aaPredicted RBP21.71■■□□□ 1.07
CD40-202ENST00000372285 TTF1Q15361 905 aaPredicted RBP21.71■■□□□ 1.07
CD40-202ENST00000372285 CRY2Q49AN0 593 aa21.71■■□□□ 1.07
CD40-202ENST00000372285 PI16Q6UXB8 463 aa21.71■■□□□ 1.07
CD40-202ENST00000372285 NECTIN1Q15223 517 aa21.7■■□□□ 1.06
CD40-202ENST00000372285 ANKRD2Q9GZV1 360 aa21.7■■□□□ 1.06
CD40-202ENST00000372285 SNX14Q9Y5W7 946 aa21.7■■□□□ 1.06
CD40-202ENST00000372285 PNPLA7Q6ZV29 1317 aa21.7■■□□□ 1.06
CD40-202ENST00000372285 ANKRD31Q8N7Z5 1873 aa21.7■■□□□ 1.06
CD40-202ENST00000372285 K7ELQ4 463 aaPredicted RBP21.69■■□□□ 1.06
CD40-202ENST00000372285 ST18O60284 1047 aa21.69■■□□□ 1.06
CD40-202ENST00000372285 CHGBP05060 677 aa21.69■■□□□ 1.06
CD40-202ENST00000372285 GRAPQ13588 217 aa21.69■■□□□ 1.06
CD40-202ENST00000372285 GRAPLQ8TC17 118 aaPredicted RBP21.69■■□□□ 1.06
CD40-202ENST00000372285 RBM8AQ9Y5S9 174 aaKnown RBP21.69■■□□□ 1.06
CD40-202ENST00000372285 CYP2E1P05181 493 aaPredicted RBP21.69■■□□□ 1.06
CD40-202ENST00000372285 SEC62Q99442 399 aaKnown RBP21.69■■□□□ 1.06
CD40-202ENST00000372285 HMG20BQ9P0W2 317 aa21.69■■□□□ 1.06
CD40-202ENST00000372285 RASEFQ8IZ41 740 aa21.68■■□□□ 1.06
CD40-202ENST00000372285 ZNF804BA4D1E1 1349 aa21.67■■□□□ 1.06
CD40-202ENST00000372285 KLRG2A4D1S0 409 aaPredicted RBP21.67■■□□□ 1.06
CD40-202ENST00000372285 BCAMP50895 628 aa21.67■■□□□ 1.06
CD40-202ENST00000372285 EZH2Q15910 746 aaKnown RBP21.67■■□□□ 1.06
CD40-202ENST00000372285 SPATA5Q8NB90 893 aa21.67■■□□□ 1.06
CD40-202ENST00000372285 NEK4P51957 841 aa21.66■■□□□ 1.06
CD40-202ENST00000372285 EN1Q05925 392 aaPredicted RBP21.66■■□□□ 1.06
CD40-202ENST00000372285 RASGRF1Q13972 1273 aa21.66■■□□□ 1.06
CD40-202ENST00000372285 RPGRQ92834 1020 aaKnown RBP21.66■■□□□ 1.06
CD40-202ENST00000372285 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.66■■□□□ 1.06
CD40-202ENST00000372285 ZSCAN25Q6NSZ9 544 aa21.66■■□□□ 1.06
CD40-202ENST00000372285 PRPF40BQ6NWY9 871 aaKnown RBP21.66■■□□□ 1.06
CD40-202ENST00000372285 CCDC129Q6ZRS4 1044 aa21.66■■□□□ 1.06
CD40-202ENST00000372285 PIH1D3Q9NQM4 214 aaKnown RBP21.66■■□□□ 1.06
CD40-202ENST00000372285 MAST3O60307 1309 aa21.65■■□□□ 1.06
CD40-202ENST00000372285 HOXA10P31260 410 aaPredicted RBP21.65■■□□□ 1.06
CD40-202ENST00000372285 KCNJ4P48050 445 aa21.65■■□□□ 1.06
CD40-202ENST00000372285 SLFNL1Q499Z3 407 aa21.65■■□□□ 1.06
CD40-202ENST00000372285 CREB3L3Q68CJ9 461 aa21.65■■□□□ 1.06
CD40-202ENST00000372285 MYH13Q9UKX3 1938 aa21.65■■□□□ 1.06
CD40-202ENST00000372285 SLC15A2Q16348 729 aa21.64■■□□□ 1.06
CD40-202ENST00000372285 RBM17Q96I25 401 aaKnown RBP21.64■■□□□ 1.06
CD40-202ENST00000372285 TM6SF1Q9BZW5 370 aa21.64■■□□□ 1.06
CD40-202ENST00000372285 U3KPZ7 1027 aaPredicted RBP21.64■■□□□ 1.06
CD40-202ENST00000372285 WTIPA6NIX2 430 aaPredicted RBP21.63■■□□□ 1.05
CD40-202ENST00000372285 SLC27A2O14975 620 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 RNF20Q5VTR2 975 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 APPBP2Q92624 585 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 OSBP2Q969R2 916 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 ANO8Q9HCE9 1232 aaPredicted RBP21.63■■□□□ 1.05
CD40-202ENST00000372285 GNL3LQ9NVN8 582 aaKnown RBP21.63■■□□□ 1.05
CD40-202ENST00000372285 ZKSCAN1P17029 563 aaPredicted RBP21.63■■□□□ 1.05
CD40-202ENST00000372285 ADD2P35612 726 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 MCM2P49736 904 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 CAVIN4Q5BKX8 364 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 FAM84BQ96KN1 310 aaPredicted RBP21.63■■□□□ 1.05
CD40-202ENST00000372285 DSCC1Q9BVC3 393 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 BRIP1Q9BX63 1249 aa21.63■■□□□ 1.05
CD40-202ENST00000372285 M0R2C6 588 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 GYG1P46976 350 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 UBE3CQ15386 1083 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 TSGA10IPQ3SY00 556 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 FBXO33Q7Z6M2 555 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 CRAMP1Q96RY5 1269 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 SLKQ9H2G2 1235 aaPredicted RBP21.62■■□□□ 1.05
CD40-202ENST00000372285 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
CD40-202ENST00000372285 LRRC37AA6NMS7 1700 aa21.61■■□□□ 1.05
CD40-202ENST00000372285 ZBTB22O15209 634 aa21.61■■□□□ 1.05
CD40-202ENST00000372285 PARP3Q9Y6F1 533 aa21.61■■□□□ 1.05
CD40-202ENST00000372285 BBOX1O75936 387 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 MMP10P09238 476 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 BAG6P46379 1132 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 WASHC4Q2M389 1173 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 SLC9C2Q5TAH2 1124 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 SPRYD3Q8NCJ5 442 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 UPF3BQ9BZI7 483 aaKnown RBP21.6■■□□□ 1.05
CD40-202ENST00000372285 IRS2Q9Y4H2 1338 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 SEMA3EO15041 775 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 IDH1O75874 414 aaKnown RBP21.6■■□□□ 1.05
CD40-202ENST00000372285 SF3B2Q13435 895 aaKnown RBP21.6■■□□□ 1.05
CD40-202ENST00000372285 LEMD3Q9Y2U8 911 aa21.6■■□□□ 1.05
CD40-202ENST00000372285 XDHP47989 1333 aa21.59■■□□□ 1.05
CD40-202ENST00000372285 HSPD1P10809 573 aaKnown RBP21.59■■□□□ 1.05
CD40-202ENST00000372285 PDE6AP16499 860 aa21.59■■□□□ 1.05
CD40-202ENST00000372285 MAP3K12Q12852 859 aa21.59■■□□□ 1.05
CD40-202ENST00000372285 TTC14Q96N46 770 aa21.59■■□□□ 1.05
CD40-202ENST00000372285 ZSWIM6Q9HCJ5 1215 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms