RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PCNTO95613 3336 aa17.04■□□□□ 0.32
LDB3-204ENST00000372066 TMEM88BA6NKF7 163 aa17.03■□□□□ 0.32
LDB3-204ENST00000372066 CD2BP2O95400 341 aaKnown RBP17.03■□□□□ 0.32
LDB3-204ENST00000372066 EIF6P56537 245 aaKnown RBP17.03■□□□□ 0.32
LDB3-204ENST00000372066 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
LDB3-204ENST00000372066 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
LDB3-204ENST00000372066 GPC2Q8N158 579 aa17.03■□□□□ 0.32
LDB3-204ENST00000372066 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
LDB3-204ENST00000372066 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
LDB3-204ENST00000372066 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
LDB3-204ENST00000372066 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
LDB3-204ENST00000372066 GRIPAP1Q4V328 841 aa17.02■□□□□ 0.32
LDB3-204ENST00000372066 CRAMP1Q96RY5 1269 aa17.02■□□□□ 0.32
LDB3-204ENST00000372066 MYD88Q99836 296 aa17.02■□□□□ 0.32
LDB3-204ENST00000372066 CWC22Q9HCG8 908 aaKnown RBP17.02■□□□□ 0.32
LDB3-204ENST00000372066 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
LDB3-204ENST00000372066 NTSR2O95665 410 aa17.02■□□□□ 0.31
LDB3-204ENST00000372066 PARP10Q53GL7 1025 aa17.02■□□□□ 0.31
LDB3-204ENST00000372066 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.31
LDB3-204ENST00000372066 KAZALD1Q96I82 304 aa17.02■□□□□ 0.31
LDB3-204ENST00000372066 NLRP3Q96P20 1036 aa17.02■□□□□ 0.31
LDB3-204ENST00000372066 CNTNAP1P78357 1384 aa17.01■□□□□ 0.31
LDB3-204ENST00000372066 PPEF1O14829 653 aaPredicted RBP17.01■□□□□ 0.31
LDB3-204ENST00000372066 IFIT2P09913 472 aaKnown RBP17.01■□□□□ 0.31
LDB3-204ENST00000372066 MAP1SQ66K74 1059 aaPredicted RBP17.01■□□□□ 0.31
LDB3-204ENST00000372066 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
LDB3-204ENST00000372066 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
LDB3-204ENST00000372066 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
LDB3-204ENST00000372066 CACNA1SQ13698 1873 aa17■□□□□ 0.31
LDB3-204ENST00000372066 UTP14AQ9BVJ6 771 aaKnown RBP17■□□□□ 0.31
LDB3-204ENST00000372066 ANO2Q9NQ90 1003 aa17■□□□□ 0.31
LDB3-204ENST00000372066 HIP1O00291 1037 aa16.99■□□□□ 0.31
LDB3-204ENST00000372066 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
LDB3-204ENST00000372066 VEGFBP49765 207 aa16.99■□□□□ 0.31
LDB3-204ENST00000372066 NUCB2P80303 420 aa16.99■□□□□ 0.31
LDB3-204ENST00000372066 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
LDB3-204ENST00000372066 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
LDB3-204ENST00000372066 SGSM2O43147 1006 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 RAD50Q92878 1312 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 SNED1Q8TER0 1413 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 AIDAQ96BJ3 306 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 EVI5LQ96CN4 794 aa16.98■□□□□ 0.31
LDB3-204ENST00000372066 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 FOXN1O15353 648 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 HSPA4P34932 840 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 EPS15P42566 896 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 AACSQ86V21 672 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
LDB3-204ENST00000372066 ATP6V0A2Q9Y487 856 aa16.97■□□□□ 0.31
LDB3-204ENST00000372066 SCN4AP35499 1836 aa16.96■□□□□ 0.31
LDB3-204ENST00000372066 SASH1O94885 1247 aa16.96■□□□□ 0.31
LDB3-204ENST00000372066 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
LDB3-204ENST00000372066 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.31
LDB3-204ENST00000372066 DIAPH3Q9NSV4 1193 aa16.96■□□□□ 0.31
LDB3-204ENST00000372066 SCNN1DP51172 638 aa16.95■□□□□ 0.3
LDB3-204ENST00000372066 AOC3Q16853 763 aa16.95■□□□□ 0.3
LDB3-204ENST00000372066 HSP90AB3PQ58FF7 597 aa16.95■□□□□ 0.3
LDB3-204ENST00000372066 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
LDB3-204ENST00000372066 ABT1Q9ULW3 272 aaKnown RBP16.95■□□□□ 0.3
LDB3-204ENST00000372066 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
LDB3-204ENST00000372066 RFX7Q2KHR2 1363 aa16.95■□□□□ 0.3
LDB3-204ENST00000372066 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 BBOX1O75936 387 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
LDB3-204ENST00000372066 CASP7P55210 303 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 SKOR2Q2VWA4 1001 aaPredicted RBP16.94■□□□□ 0.3
LDB3-204ENST00000372066 RASSF10A6NK89 507 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 H7C1W4 665 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
LDB3-204ENST00000372066 NEK4P51957 841 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 NLRP10Q86W26 655 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 CCDC191Q8NCU4 936 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
LDB3-204ENST00000372066 CWC25Q9NXE8 425 aaPredicted RBP16.94■□□□□ 0.3
LDB3-204ENST00000372066 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
LDB3-204ENST00000372066 COL4A5P29400 1685 aa16.93■□□□□ 0.3
LDB3-204ENST00000372066 RFX5P48382 616 aaPredicted RBP16.93■□□□□ 0.3
LDB3-204ENST00000372066 TCIRG1Q13488 830 aa16.93■□□□□ 0.3
LDB3-204ENST00000372066 USP50Q70EL3 339 aaPredicted RBP16.93■□□□□ 0.3
LDB3-204ENST00000372066 SP8Q8IXZ3 490 aa16.93■□□□□ 0.3
LDB3-204ENST00000372066 INTS4Q96HW7 963 aaKnown RBP16.93■□□□□ 0.3
LDB3-204ENST00000372066 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
LDB3-204ENST00000372066 PRDM10Q9NQV6 1147 aa16.93■□□□□ 0.3
LDB3-204ENST00000372066 WBP1LQ9NX94 342 aa16.93■□□□□ 0.3
LDB3-204ENST00000372066 NUP98P52948 1817 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 CUL4AQ13619 759 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
LDB3-204ENST00000372066 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
LDB3-204ENST00000372066 TICAM2Q86XR7 235 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 MPNDQ8N594 471 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 EAF2Q96CJ1 260 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms