RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 EP400Q96L91 3159 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 RNF113AO15541 343 aaKnown RBP21.1■□□□□ 0.97
SSBP3-203ENST00000371319 UQCRFS1P1P0C7P4 283 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 TM4SF1P30408 202 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 DDIT3P35638 169 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 SLFNL1Q499Z3 407 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 PRPF40BQ6NWY9 871 aaKnown RBP21.1■□□□□ 0.97
SSBP3-203ENST00000371319 CCDC129Q6ZRS4 1044 aa21.1■□□□□ 0.97
SSBP3-203ENST00000371319 FBXO41Q8TF61 875 aa21.09■□□□□ 0.97
SSBP3-203ENST00000371319 MYO5AQ9Y4I1 1855 aaKnown RBP21.08■□□□□ 0.97
SSBP3-203ENST00000371319 CREB3L3Q68CJ9 461 aa21.08■□□□□ 0.97
SSBP3-203ENST00000371319 CNBD1Q8NA66 436 aa21.08■□□□□ 0.97
SSBP3-203ENST00000371319 PRR5LQ6MZQ0 368 aa21.07■□□□□ 0.96
SSBP3-203ENST00000371319 MINPP1Q9UNW1 487 aa21.07■□□□□ 0.96
SSBP3-203ENST00000371319 DOCK2Q92608 1830 aa21.07■□□□□ 0.96
SSBP3-203ENST00000371319 SLC27A2O14975 620 aa21.06■□□□□ 0.96
SSBP3-203ENST00000371319 CYP2E1P05181 493 aaPredicted RBP21.06■□□□□ 0.96
SSBP3-203ENST00000371319 RPS8P62241 208 aaKnown RBP21.06■□□□□ 0.96
SSBP3-203ENST00000371319 IL27Q8NEV9 243 aa21.06■□□□□ 0.96
SSBP3-203ENST00000371319 MAST3O60307 1309 aa21.06■□□□□ 0.96
SSBP3-203ENST00000371319 UPF3BQ9BZI7 483 aaKnown RBP21.06■□□□□ 0.96
SSBP3-203ENST00000371319 PIH1D3Q9NQM4 214 aaKnown RBP21.06■□□□□ 0.96
SSBP3-203ENST00000371319 M0R2C6 588 aa21.05■□□□□ 0.96
SSBP3-203ENST00000371319 NPHP1O15259 732 aa21.05■□□□□ 0.96
SSBP3-203ENST00000371319 SERPINB2P05120 415 aa21.05■□□□□ 0.96
SSBP3-203ENST00000371319 MCM2P49736 904 aa21.05■□□□□ 0.96
SSBP3-203ENST00000371319 DDR1Q08345 913 aa21.05■□□□□ 0.96
SSBP3-203ENST00000371319 LRRFIP1Q32MZ4 808 aaKnown RBP21.05■□□□□ 0.96
SSBP3-203ENST00000371319 HMG20BQ9P0W2 317 aa21.05■□□□□ 0.96
SSBP3-203ENST00000371319 ZFYP08048 801 aaPredicted RBP21.04■□□□□ 0.96
SSBP3-203ENST00000371319 KCNJ4P48050 445 aa21.04■□□□□ 0.96
SSBP3-203ENST00000371319 UBE4AQ14139 1066 aa21.04■□□□□ 0.96
SSBP3-203ENST00000371319 TTF1Q15361 905 aaPredicted RBP21.04■□□□□ 0.96
SSBP3-203ENST00000371319 TTC14Q96N46 770 aa21.04■□□□□ 0.96
SSBP3-203ENST00000371319 CHMP5Q9NZZ3 219 aa21.04■□□□□ 0.96
SSBP3-203ENST00000371319 BCAMP50895 628 aa21.03■□□□□ 0.96
SSBP3-203ENST00000371319 ADCK5Q3MIX3 580 aa21.03■□□□□ 0.96
SSBP3-203ENST00000371319 OSBP2Q969R2 916 aa21.03■□□□□ 0.96
SSBP3-203ENST00000371319 TM6SF1Q9BZW5 370 aa21.03■□□□□ 0.96
SSBP3-203ENST00000371319 TFCP2L1Q9NZI6 479 aa21.03■□□□□ 0.96
SSBP3-203ENST00000371319 RPAP1Q9BWH6 1393 aaPredicted RBP21.03■□□□□ 0.96
SSBP3-203ENST00000371319 POLRMTO00411 1230 aaKnown RBP21.02■□□□□ 0.96
SSBP3-203ENST00000371319 RASGRF1Q13972 1273 aa21.02■□□□□ 0.96
SSBP3-203ENST00000371319 NBR1Q14596 966 aa21.02■□□□□ 0.96
SSBP3-203ENST00000371319 COL23A1Q86Y22 540 aaPredicted RBP21.02■□□□□ 0.96
SSBP3-203ENST00000371319 SPATA5Q8NB90 893 aa21.02■□□□□ 0.96
SSBP3-203ENST00000371319 FOXD4L1Q9NU39 408 aa21.02■□□□□ 0.96
SSBP3-203ENST00000371319 U3KPZ7 1027 aaPredicted RBP21.02■□□□□ 0.96
SSBP3-203ENST00000371319 NRXN2Q9P2S2 1712 aa21.02■□□□□ 0.96
SSBP3-203ENST00000371319 WTIPA6NIX2 430 aaPredicted RBP21.02■□□□□ 0.95
SSBP3-203ENST00000371319 ZKSCAN1P17029 563 aaPredicted RBP21.02■□□□□ 0.95
SSBP3-203ENST00000371319 ST5P78524 1137 aa21.02■□□□□ 0.95
SSBP3-203ENST00000371319 TSGA10IPQ3SY00 556 aa21.02■□□□□ 0.95
SSBP3-203ENST00000371319 APPBP2Q92624 585 aa21.02■□□□□ 0.95
SSBP3-203ENST00000371319 JAKMIP1Q96N16 626 aaKnown RBP21.02■□□□□ 0.95
SSBP3-203ENST00000371319 DSCC1Q9BVC3 393 aa21.02■□□□□ 0.95
SSBP3-203ENST00000371319 ZSWIM6Q9HCJ5 1215 aa21.02■□□□□ 0.95
SSBP3-203ENST00000371319 ZNF804BA4D1E1 1349 aa21.01■□□□□ 0.95
SSBP3-203ENST00000371319 ADD2P35612 726 aa21.01■□□□□ 0.95
SSBP3-203ENST00000371319 VPS53Q5VIR6 699 aa21.01■□□□□ 0.95
SSBP3-203ENST00000371319 RNF20Q5VTR2 975 aa21.01■□□□□ 0.95
SSBP3-203ENST00000371319 TMX3Q96JJ7 454 aa21.01■□□□□ 0.95
SSBP3-203ENST00000371319 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.01■□□□□ 0.958e-7■■■□□ 19
SSBP3-203ENST00000371319 TAF6LQ9Y6J9 622 aa21.01■□□□□ 0.95
SSBP3-203ENST00000371319 HSP90AA1P07900 732 aaKnown RBP21■□□□□ 0.95
SSBP3-203ENST00000371319 CASTP20810 708 aaKnown RBP21■□□□□ 0.95
SSBP3-203ENST00000371319 GRAPQ13588 217 aa21■□□□□ 0.95
SSBP3-203ENST00000371319 NFKBIBQ15653 356 aa21■□□□□ 0.95
SSBP3-203ENST00000371319 ZSCAN25Q6NSZ9 544 aa21■□□□□ 0.95
SSBP3-203ENST00000371319 GRAPLQ8TC17 118 aaPredicted RBP21■□□□□ 0.95
SSBP3-203ENST00000371319 ANKRD2Q9GZV1 360 aa21■□□□□ 0.95
SSBP3-203ENST00000371319 CIZ1Q9ULV3 898 aaPredicted RBP21■□□□□ 0.95
SSBP3-203ENST00000371319 CPA1P15085 419 aa20.99■□□□□ 0.95
SSBP3-203ENST00000371319 WASHC4Q2M389 1173 aa20.99■□□□□ 0.95
SSBP3-203ENST00000371319 CRY2Q49AN0 593 aa20.99■□□□□ 0.95
SSBP3-203ENST00000371319 ANKRD31Q8N7Z5 1873 aa20.99■□□□□ 0.95
SSBP3-203ENST00000371319 HSPD1P10809 573 aaKnown RBP20.98■□□□□ 0.95
SSBP3-203ENST00000371319 GYG1P46976 350 aa20.98■□□□□ 0.95
SSBP3-203ENST00000371319 CUL4AQ13619 759 aa20.98■□□□□ 0.95
SSBP3-203ENST00000371319 PUS7LQ9H0K6 701 aaKnown RBP20.98■□□□□ 0.95
SSBP3-203ENST00000371319 COL1A1P02452 1464 aaPredicted RBP20.98■□□□□ 0.95
SSBP3-203ENST00000371319 TCRBV5S4A2TA0A5A2 114 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 PDE6AP16499 860 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 UBE3CQ15386 1083 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 RUFY3Q7L099 469 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 FLAD1Q8NFF5 587 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 WWC3Q9ULE0 1092 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 CYP46A1Q9Y6A2 500 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 PNPLA7Q6ZV29 1317 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 FOXP2O15409 715 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 IDH1O75874 414 aaKnown RBP20.97■□□□□ 0.95
SSBP3-203ENST00000371319 PSMA5P28066 241 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 AK2P54819 239 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 SLC9C2Q5TAH2 1124 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 LAMA4Q16363 1823 aa20.97■□□□□ 0.95
SSBP3-203ENST00000371319 CYP21A2P08686 494 aa20.96■□□□□ 0.95
SSBP3-203ENST00000371319 KLRK1P26718 216 aa20.96■□□□□ 0.95
SSBP3-203ENST00000371319 COL9A3Q14050 684 aaPredicted RBP20.96■□□□□ 0.95
SSBP3-203ENST00000371319 NOL8Q76FK4 1167 aaKnown RBP20.96■□□□□ 0.95
SSBP3-203ENST00000371319 FBXO33Q7Z6M2 555 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms