RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SLC5A1P13866 664 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 CYP7A1P22680 504 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 PTGS1P23219 599 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 AOPEPQ8N6M6 819 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 UBXN4Q92575 508 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 RUFY1Q96T51 708 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 ALG1Q9BT22 464 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 NOL7Q9UMY1 257 aaKnown RBP10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 NIP7Q9Y221 180 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 DCCP43146 1447 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 TOP1P11387 765 aaKnown RBP10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 CADPS2Q86UW7 1296 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 USP54Q70EL1 1684 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 PRC1O43663 620 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 MFSD6Q6ZSS7 791 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 IQCA1Q86XH1 822 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 NCOA7Q8NI08 942 aa10.55□□□□□ -0.72
SMARCA1-202ENST00000371122 ERCC3P19447 782 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 IP6K1Q92551 441 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 SNX14Q9Y5W7 946 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 MYOM1P52179 1685 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 PTH1RQ03431 593 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 SSRP1Q08945 709 aaKnown RBP10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 TMEM63CQ9P1W3 806 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 SLC4A4Q9Y6R1 1079 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 TTC21AQ8NDW8 1320 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 MAP3K5Q99683 1374 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 KCNQ4P56696 695 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 CHMP4BP1P59074 171 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 SMARCE1Q969G3 411 aa10.54□□□□□ -0.72
SMARCA1-202ENST00000371122 A0A1B0GUL7 405 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 MCM5P33992 734 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 SPTY2D1Q68D10 685 aaPredicted RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 ZNF444Q8N0Y2 327 aaPredicted RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 DDX21Q9NR30 783 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 CCDC96Q2M329 555 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 ZNF622Q969S3 477 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 PLEKHF1Q96S99 279 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 ZNHIT6Q9NWK9 470 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 CCDC171Q6TFL3 1326 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 ALDH1L1O75891 902 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 EAF2Q96CJ1 260 aaPredicted RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 B4E1Z4 1266 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 ZBTB43O43298 467 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 TYRO3Q06418 890 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 KIF4BQ2VIQ3 1234 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 DNAJC10Q8IXB1 793 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 CMTR1Q8N1G2 835 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 C8orf37Q96NL8 207 aa10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 DDX19AQ9NUU7 478 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-202ENST00000371122 IRS4O14654 1257 aaPredicted RBP10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 SYKP43405 635 aa10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 PPARDQ03181 441 aa10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 CCDC102AQ96A19 550 aa10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 BTG4Q9NY30 223 aa10.52□□□□□ -0.72
SMARCA1-202ENST00000371122 TULP4Q9NRJ4 1543 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 HMGB1P09429 215 aaKnown RBP10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 SKILP12757 684 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 CRACR2BQ8N4Y2 399 aaPredicted RBP10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 ITSN1Q15811 1721 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 CCDC194A0A1B0GVG4 234 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 ZNF76P36508 570 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.732e-7■■■□□ 19.2
SMARCA1-202ENST00000371122 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 NBPF5PQ86XG9 351 aaPredicted RBP10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 STAMQ92783 540 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 MAPK8IP1Q9UQF2 711 aa10.52□□□□□ -0.73
SMARCA1-202ENST00000371122 SGSM2O43147 1006 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 PICALMQ13492 652 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 SLFNL1Q499Z3 407 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 RUFY3Q7L099 469 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 CDC37L1Q7L3B6 337 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 KIAA1328Q86T90 577 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 PHKBQ93100 1093 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 ZNF521Q96K83 1311 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 SMTNL1A8MU46 457 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 LIG1P18858 919 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 CLCN1P35523 988 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 EIF4A1P60842 406 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 WTAPQ15007 396 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 KIF18AQ8NI77 898 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 TLR7Q9NYK1 1049 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 NHSL1Q5SYE7 1610 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 AKAP12Q02952 1782 aa10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 IL15P40933 162 aaPredicted RBP10.51□□□□□ -0.73
SMARCA1-202ENST00000371122 STIM1Q13586 685 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms