RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 RIPOR2Q9Y4F9 1068 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 TERF1P54274 439 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 TTC39AQ5SRH9 613 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 GPT2Q8TD30 523 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
PRPF38B-203ENST00000370025 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 XAGE2Q96GT9 111 aa11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 GOLIM4O00461 696 aa11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 MAP4K1Q92918 833 aa11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 LMBRD1Q9NUN5 540 aa11.86□□□□□ -0.51
PRPF38B-203ENST00000370025 FAM182BQ5T319 152 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 KCNQ4P56696 695 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 LRRFIP1Q32MZ4 808 aaKnown RBP11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 BTAF1O14981 1849 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 TMX3Q96JJ7 454 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 MED23Q9ULK4 1368 aa11.85□□□□□ -0.51
PRPF38B-203ENST00000370025 RGL2O15211 777 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 PTMSP20962 102 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 NHSQ6T4R5 1651 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 ATRNO75882 1429 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 NTSR2O95665 410 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 PDCL2Q8N4E4 241 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 KCNB2Q92953 911 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 USP25Q9UHP3 1055 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 ADORA1P30542 326 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 NUCB2P80303 420 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 MPHOSPH8Q99549 860 aa11.84□□□□□ -0.51
PRPF38B-203ENST00000370025 MROH5Q6ZUA9 1318 aa11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 CREB3L3Q68CJ9 461 aa11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 KIF3AQ9Y496 699 aa11.83□□□□□ -0.51
PRPF38B-203ENST00000370025 PDE8BO95263 885 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 ZNF445P59923 1031 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 TAF5LO75529 589 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 CASTP20810 708 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 PSMA5P28066 241 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 UTP14CQ5TAP6 766 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 MYRIPQ8NFW9 859 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 CYP46A1Q9Y6A2 500 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 SPEF2Q9C093 1822 aa11.83□□□□□ -0.52
PRPF38B-203ENST00000370025 GNPATO15228 680 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 ZPR1O75312 459 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 SLC27A2O14975 620 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 CUL4AQ13619 759 aa11.82□□□□□ -0.52
PRPF38B-203ENST00000370025 ERICH4A6NGS2 130 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 NOLC1Q14978 699 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 VGLL2Q8N8G2 317 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 SPC24Q8NBT2 197 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 INTS4Q96HW7 963 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 BICDL1Q6ZP65 573 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 LPIN2Q92539 896 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 TTC14Q96N46 770 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 PDRG1Q9NUG6 133 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 ZMYM1Q5SVZ6 1142 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 SEC62Q99442 399 aaKnown RBP11.81□□□□□ -0.52
PRPF38B-203ENST00000370025 SEC31BQ9NQW1 1179 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms