RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 AFDNP55196 1824 aaKnown RBP6.11□□□□□ -1.43
UBE3D-202ENST00000369746 FAM200BP0CF97 657 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 PDE4AP27815 886 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 HSP90AB2PQ58FF8 381 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 MFSD4BQ5TF39 518 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 ANKRD13DQ6ZTN6 518 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 NYAP1Q6ZVC0 841 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 ACRBPQ8NEB7 543 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 PAGR1Q9BTK6 254 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 CEP126Q9P2H0 1117 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 RAD50Q92878 1312 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 DYTNA2CJ06 578 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 TGFB3P10600 412 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 DPEP1P16444 411 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 USP5P45974 858 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 ZKSCAN8Q15776 578 aaPredicted RBP6.11□□□□□ -1.43
UBE3D-202ENST00000369746 TRAPPC3LQ5T215 181 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 FMNL3Q8IVF7 1028 aa6.11□□□□□ -1.43
UBE3D-202ENST00000369746 TMA7Q9Y2S6 64 aaKnown RBP6.11□□□□□ -1.43
UBE3D-202ENST00000369746 ZNF330Q9Y3S2 320 aaPredicted RBP6.11□□□□□ -1.43
UBE3D-202ENST00000369746 ERICH4A6NGS2 130 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 TULP2O00295 520 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 XRCC6P12956 609 aaKnown RBP eCLIP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 RRM1P23921 792 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 LONRF1Q17RB8 773 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 B4GALNT3Q6L9W6 998 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 CTU1Q7Z7A3 348 aaKnown RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 ZNF512BQ96KM6 892 aaPredicted RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 SFMBT1Q9UHJ3 866 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 IQSEC3Q9UPP2 1182 aaPredicted RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 RTCBQ9Y3I0 505 aaKnown RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 A0A087WZG4 1122 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 SATB1Q01826 763 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 NOGQ13253 232 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 CCDC144BQ3MJ40 725 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 C1QTNF12Q5T7M4 302 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 CC2D1AQ6P1N0 951 aaPredicted RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 RPUSD2Q8IZ73 545 aaKnown RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 RSPH9Q9H1X1 276 aaPredicted RBP6.1□□□□□ -1.43
UBE3D-202ENST00000369746 CXorf56Q9H5V9 222 aa6.1□□□□□ -1.43
UBE3D-202ENST00000369746 RECKO95980 971 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 PRIM1P49642 420 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 PDAP1Q13442 181 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 AKAP4Q5JQC9 854 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 SDE2Q6IQ49 451 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 CALR3Q96L12 384 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 TAF1DQ9H5J8 278 aaPredicted RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 SWAP70Q9UH65 585 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 SMC3Q9UQE7 1217 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 COG6Q9Y2V7 657 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 SYNGAP1Q96PV0 1343 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 KTN1Q86UP2 1357 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 SSC5DA1L4H1 1573 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 TLDC2A0PJX2 215 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 NUTM2FA1L443 756 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 MMP10P09238 476 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 TATP17735 454 aaPredicted RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 MCM5P33992 734 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 FKBP1BP68106 108 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 IRX5P78411 483 aaPredicted RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 GABPB1Q06547 395 aaPredicted RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 PLEKHG6Q3KR16 790 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 TTLL6Q8N841 843 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 PNISRQ8TF01 805 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 DDX27Q96GQ7 796 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 ARPC5LQ9BPX5 153 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 SENP7Q9BQF6 1050 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 BCS1LQ9Y276 419 aa6.09□□□□□ -1.43
UBE3D-202ENST00000369746 USP42Q9H9J4 1324 aaKnown RBP6.09□□□□□ -1.43
UBE3D-202ENST00000369746 UBR2Q8IWV8 1755 aa6.09□□□□□ -1.44
UBE3D-202ENST00000369746 KIF20BQ96Q89 1820 aa6.09□□□□□ -1.44
UBE3D-202ENST00000369746 EP400Q96L91 3159 aa6.09□□□□□ -1.44
UBE3D-202ENST00000369746 POM121CA8CG34 1229 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 STK25O00506 426 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 GYS1P13807 737 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 HDGFL1Q5TGJ6 251 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 CNKSR1Q969H4 720 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 IL17RAQ96F46 866 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 DMGDHQ9UI17 866 aaKnown RBP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 HACL1Q9UJ83 578 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 SPG7Q9UQ90 795 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 KLRG2A4D1S0 409 aaPredicted RBP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 PES1O00541 588 aaKnown RBP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 CCT2P78371 535 aaKnown RBP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 ENOX2Q16206 610 aaKnown RBP6.08□□□□□ -1.44
UBE3D-202ENST00000369746 CCDC102AQ96A19 550 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 MUC3BQ9H195 1237 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 BRMS1Q9HCU9 246 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 KIF3AQ9Y496 699 aa6.08□□□□□ -1.44
UBE3D-202ENST00000369746 CCDC88AQ3V6T2 1871 aa6.07□□□□□ -1.44
UBE3D-202ENST00000369746 LOC102724428A0A0B4J2F2 783 aa6.07□□□□□ -1.44
UBE3D-202ENST00000369746 SIK1P57059 783 aa6.07□□□□□ -1.44
UBE3D-202ENST00000369746 POU5F1Q01860 360 aaKnown RBP6.07□□□□□ -1.44
UBE3D-202ENST00000369746 E2F5Q15329 346 aa6.07□□□□□ -1.44
UBE3D-202ENST00000369746 SF3A1Q15459 793 aaKnown RBP6.07□□□□□ -1.44
UBE3D-202ENST00000369746 MAP9Q49MG5 647 aa6.07□□□□□ -1.44
UBE3D-202ENST00000369746 TTC39BQ5VTQ0 682 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms