RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.57
SYNCRIP-202ENST00000369622 E2F4Q16254 413 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 CACTINQ8WUQ7 758 aaKnown RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 ERCC4Q92889 916 aaPredicted RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 METTL22Q9BUU2 404 aaPredicted RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 GEMIN8Q9NWZ8 242 aaKnown RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 PAXBP1Q9Y5B6 917 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 ANKRD65E5RJM6 399 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 GOLIM4O00461 696 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 SYCP1Q15431 976 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 DDX19AQ9NUU7 478 aaKnown RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 PTPN12Q05209 780 aaKnown RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 SMARCE1Q969G3 411 aa18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 NCOA5Q9HCD5 579 aaKnown RBP18.63■□□□□ 0.57
SYNCRIP-202ENST00000369622 TIMM10P62072 90 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 APOBRQ0VD83 1088 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 KRT32Q14532 448 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 LMBR1LQ6UX01 489 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 KRT28Q7Z3Y7 464 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 ARHGAP23Q9P227 1491 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 GOLGA6L19H0YKK7 550 aa18.62■□□□□ 0.57
SYNCRIP-202ENST00000369622 TPM3P06753 285 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 SLC52A2Q9HAB3 445 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 ELP1O95163 1332 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 SLIT1O75093 1534 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 ATP5JP18859 108 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 SCRN1Q12765 414 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 ICE2Q659A1 982 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 CLIP2Q9UDT6 1046 aa18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
SYNCRIP-202ENST00000369622 CABLES1Q8TDN4 633 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 COL15A1P39059 1388 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 MED23Q9ULK4 1368 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 LTN1O94822 1766 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 CHRNA2Q15822 529 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 CCDC144BQ3MJ40 725 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 CCDC144CPQ8IYA2 1237 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 TATP17735 454 aaPredicted RBP18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 CASQ1P31415 396 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 PLA2G4AP47712 749 aa18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 U3KPZ7 1027 aaPredicted RBP18.6■□□□□ 0.57
SYNCRIP-202ENST00000369622 RGPD2P0DJD1 1756 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 UTYO14607 1347 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 BECN2A8MW95 431 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 PTPN14Q15678 1187 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 CT47A1Q5JQC4 288 aaPredicted RBP18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 PATL2C9JE40 543 aaKnown RBP18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 SEC31AO94979 1220 aaKnown RBP18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 CLCN6P51797 869 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 ZSCAN26Q16670 478 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 CFAP45Q9UL16 551 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 FHOD1Q9Y613 1164 aa18.59■□□□□ 0.57
SYNCRIP-202ENST00000369622 ME1P48163 572 aa18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 ZNF75DP51815 510 aa18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 FILIP1Q7Z7B0 1213 aa18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 RAB11FIP4Q86YS3 637 aa18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 CCAR1Q8IX12 1150 aaKnown RBP18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 BANK1Q8NDB2 785 aa18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 COPRSQ9NQ92 184 aa18.58■□□□□ 0.57
SYNCRIP-202ENST00000369622 RESTQ13127 1097 aa18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 CCDC85AQ96PX6 553 aaPredicted RBP18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 SNRPA1P09661 255 aaKnown RBP18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 PNMA6AP0CW24 399 aaPredicted RBP18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 CCDC34Q96HJ3 373 aa18.58■□□□□ 0.56
SYNCRIP-202ENST00000369622 YY1AP1Q9H869 796 aa18.57■□□□□ 0.56
SYNCRIP-202ENST00000369622 FAM53CQ9NYF3 392 aa18.57■□□□□ 0.56
SYNCRIP-202ENST00000369622 MMP14P50281 582 aa18.57■□□□□ 0.56
SYNCRIP-202ENST00000369622 ZNF594Q96JF6 807 aaPredicted RBP18.57■□□□□ 0.56
SYNCRIP-202ENST00000369622 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
SYNCRIP-202ENST00000369622 PTPDC1A2A3K4 754 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 TEX35Q5T0J7 233 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 MYCBPQ99417 103 aaPredicted RBP18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 EPC1Q9H2F5 836 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 ZNF609O15014 1411 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 HEG1Q9ULI3 1381 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 HAND2P61296 217 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 OTUD7BQ6GQQ9 843 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 ERBB3P21860 1342 aa18.56■□□□□ 0.56
SYNCRIP-202ENST00000369622 PHKG2P15735 406 aa18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 RFX5P48382 616 aaPredicted RBP18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 CABP4P57796 275 aa18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 C11orf57Q6ZUT1 292 aaPredicted RBP18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 NFAT5O94916 1531 aa18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 TTLL5Q6EMB2 1281 aa18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 USP28Q96RU2 1077 aa18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 CLGNO14967 610 aa18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 KINO60870 393 aaKnown RBP18.55■□□□□ 0.56
SYNCRIP-202ENST00000369622 SLU7O95391 586 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms