RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
PHTF1-204ENST00000369604 RIMS1Q86UR5 1692 aaKnown RBP16.67■□□□□ 0.26
PHTF1-204ENST00000369604 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
PHTF1-204ENST00000369604 POLR3DP05423 398 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-204ENST00000369604 UBASH3AP57075 661 aa16.67■□□□□ 0.26
PHTF1-204ENST00000369604 FMR1NBQ8N0W7 255 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-204ENST00000369604 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
PHTF1-204ENST00000369604 KLHDC4Q8TBB5 520 aa16.67■□□□□ 0.26
PHTF1-204ENST00000369604 ZSWIM4Q9H7M6 989 aa16.67■□□□□ 0.26
PHTF1-204ENST00000369604 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
PHTF1-204ENST00000369604 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
PHTF1-204ENST00000369604 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
PHTF1-204ENST00000369604 PDILTQ8N807 584 aa16.66■□□□□ 0.26
PHTF1-204ENST00000369604 LCMT1Q9UIC8 334 aa16.66■□□□□ 0.26
PHTF1-204ENST00000369604 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 KCNQ3O43525 872 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 ATP8B1O43520 1251 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 CHGBP05060 677 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 CYP21A2P08686 494 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 TOP1P11387 765 aaKnown RBP16.65■□□□□ 0.26
PHTF1-204ENST00000369604 PPP2R3AQ06190 1150 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 AIMP1Q12904 312 aaKnown RBP16.65■□□□□ 0.26
PHTF1-204ENST00000369604 MTX1Q13505 466 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 LLPHQ9BRT6 129 aaKnown RBP16.65■□□□□ 0.26
PHTF1-204ENST00000369604 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-204ENST00000369604 SBNO1A3KN83 1393 aa16.65■□□□□ 0.26
PHTF1-204ENST00000369604 OVOS2A0A0J9YW53 1432 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 OVOS2Q6IE36 1432 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 NLRP6P59044 892 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 TRIM65Q6PJ69 517 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 LEKR1Q6ZMV7 388 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 C14orf37Q86TY3 774 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 SMARCC2Q8TAQ2 1214 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 PFKFB2O60825 505 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 KCNJ6P48051 423 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 ADALQ6DHV7 355 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 GPR161Q8N6U8 529 aaKnown RBP16.64■□□□□ 0.25
PHTF1-204ENST00000369604 BICC1Q9H694 974 aaKnown RBP16.64■□□□□ 0.25
PHTF1-204ENST00000369604 ADAM21Q9UKJ8 722 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
PHTF1-204ENST00000369604 PARD6BQ9BYG5 372 aa16.64■□□□□ 0.25
PHTF1-204ENST00000369604 MED23Q9ULK4 1368 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 NLRP12P59046 1061 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 MCM6Q14566 821 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 HSP90AA4PQ58FG1 418 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 KDRP35968 1356 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 ALDH1L1O75891 902 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 LGR6Q9HBX8 967 aa16.63■□□□□ 0.25
PHTF1-204ENST00000369604 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
PHTF1-204ENST00000369604 CBFA2T2O43439 604 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 CTDNEP1O95476 244 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 GOLGA6L1Q8N7Z2 621 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 CLIC4Q9Y696 253 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 ZNF202O95125 648 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
PHTF1-204ENST00000369604 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 VPS18Q9P253 973 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 DPF2Q92785 391 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 PPP2R2CQ9Y2T4 447 aa16.62■□□□□ 0.25
PHTF1-204ENST00000369604 RRP15Q9Y3B9 282 aaKnown RBP16.62■□□□□ 0.25
PHTF1-204ENST00000369604 REXO1L1PQ8IX06 675 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 FBXO18Q8NFZ0 1043 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 WDR24Q96S15 920 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
PHTF1-204ENST00000369604 SPTLC2O15270 562 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 FANCGO15287 622 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 EFCC1Q9HA90 598 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 USP6P35125 1406 aa16.61■□□□□ 0.25
PHTF1-204ENST00000369604 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 GRM8O00222 908 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 PSME1Q06323 249 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 DDX46Q7L014 1031 aaKnown RBP16.6■□□□□ 0.25
PHTF1-204ENST00000369604 BPIFA3Q9BQP9 254 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 FAM208AQ9UK61 1670 aaKnown RBP16.6■□□□□ 0.25
PHTF1-204ENST00000369604 C3P01024 1663 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 NCAPHQ15003 741 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 GOLGA1Q92805 767 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 EXOC4Q96A65 974 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
PHTF1-204ENST00000369604 LINC00301Q8NCQ3 95 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 RTEL1Q9NZ71 1219 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 USP31Q70CQ4 1352 aa16.6■□□□□ 0.25
PHTF1-204ENST00000369604 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms