RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 MKRN1Q9UHC7 482 aaKnown RBP25.87■■□□□ 1.73
SMNDC1-201ENST00000369592 SNAP23O00161 211 aa25.86■■□□□ 1.73
SMNDC1-201ENST00000369592 LDHAL6AQ6ZMR3 332 aa25.86■■□□□ 1.73
SMNDC1-201ENST00000369592 COA1Q9GZY4 146 aa25.86■■□□□ 1.73
SMNDC1-201ENST00000369592 RIPOR2Q9Y4F9 1068 aa25.86■■□□□ 1.73
SMNDC1-201ENST00000369592 TAF5LO75529 589 aa25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 BCAR3O75815 825 aa25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 INTS3Q68E01 1043 aaKnown RBP25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 HELBQ8NG08 1087 aaPredicted RBP25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 ZC3H15Q8WU90 426 aaKnown RBP25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 PUS3Q9BZE2 481 aaKnown RBP25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 CREBZFQ9NS37 354 aa25.85■■□□□ 1.73
SMNDC1-201ENST00000369592 RSBN1LQ6PCB5 846 aaPredicted RBP25.84■■□□□ 1.73
SMNDC1-201ENST00000369592 AGBL3Q8NEM8 1001 aa25.84■■□□□ 1.73
SMNDC1-201ENST00000369592 POLR2AP24928 1970 aaKnown RBP25.84■■□□□ 1.73
SMNDC1-201ENST00000369592 TRPM7Q96QT4 1865 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 USP17L3A6NCW0 530 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 USP17L4A6NCW7 530 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 G3V3G9 751 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 H7C1D1 291 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 EGFRP00533 1210 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 ZNF280AP59817 542 aaPredicted RBP25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 DCAF8Q5TAQ9 597 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 USP17L1Q7RTZ2 530 aa25.83■■□□□ 1.73
SMNDC1-201ENST00000369592 FOXN1O15353 648 aa25.82■■□□□ 1.72
SMNDC1-201ENST00000369592 RFX5P48382 616 aaPredicted RBP25.82■■□□□ 1.72
SMNDC1-201ENST00000369592 DACT2Q5SW24 774 aa25.82■■□□□ 1.72
SMNDC1-201ENST00000369592 TRIM27P14373 513 aa25.81■■□□□ 1.72
SMNDC1-201ENST00000369592 TAF7LQ5H9L4 462 aa25.81■■□□□ 1.72
SMNDC1-201ENST00000369592 SAMD7Q7Z3H4 446 aa25.81■■□□□ 1.72
SMNDC1-201ENST00000369592 CNNM1Q9NRU3 951 aa25.81■■□□□ 1.72
SMNDC1-201ENST00000369592 STRIP1Q5VSL9 837 aa25.8■■□□□ 1.72
SMNDC1-201ENST00000369592 CD209Q9NNX6 404 aa25.8■■□□□ 1.72
SMNDC1-201ENST00000369592 TNNQ9UQP3 1299 aa25.8■■□□□ 1.72
SMNDC1-201ENST00000369592 ATF7IPQ6VMQ6 1270 aa25.79■■□□□ 1.72
SMNDC1-201ENST00000369592 VGLL2Q8N8G2 317 aa25.79■■□□□ 1.72
SMNDC1-201ENST00000369592 IPO8O15397 1037 aaKnown RBP25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 IL1R1P14778 569 aa25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 KCNJ4P48050 445 aa25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 FMR1Q06787 632 aaKnown RBP eCLIP25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 UBE4AQ14139 1066 aa25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 LRRC24Q50LG9 513 aa25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 MEIS3Q99687 375 aa25.78■■□□□ 1.72
SMNDC1-201ENST00000369592 TMEM88BA6NKF7 163 aa25.77■■□□□ 1.72
SMNDC1-201ENST00000369592 UBTFL1P0CB47 393 aaPredicted RBP25.77■■□□□ 1.72
SMNDC1-201ENST00000369592 TBC1D10BQ4KMP7 808 aaPredicted RBP25.77■■□□□ 1.72
SMNDC1-201ENST00000369592 PRDM10Q9NQV6 1147 aa25.77■■□□□ 1.72
SMNDC1-201ENST00000369592 MROH5Q6ZUA9 1318 aa25.77■■□□□ 1.72
SMNDC1-201ENST00000369592 TRAF5O00463 557 aa25.76■■□□□ 1.71
SMNDC1-201ENST00000369592 PTPN12Q05209 780 aaKnown RBP25.76■■□□□ 1.71
SMNDC1-201ENST00000369592 KLHDC4Q8TBB5 520 aa25.76■■□□□ 1.71
SMNDC1-201ENST00000369592 MXD3Q9BW11 206 aa25.76■■□□□ 1.71
SMNDC1-201ENST00000369592 CNTNAP1P78357 1384 aa25.76■■□□□ 1.71
SMNDC1-201ENST00000369592 USP17L8P0C7I0 530 aa25.75■■□□□ 1.71
SMNDC1-201ENST00000369592 CST9Q5W186 159 aa25.75■■□□□ 1.71
SMNDC1-201ENST00000369592 MYO3BQ8WXR4 1341 aa25.74■■□□□ 1.71
SMNDC1-201ENST00000369592 KIF4BQ2VIQ3 1234 aa25.74■■□□□ 1.71
SMNDC1-201ENST00000369592 TTLL5Q6EMB2 1281 aa25.74■■□□□ 1.71
SMNDC1-201ENST00000369592 AIDAQ96BJ3 306 aa25.74■■□□□ 1.71
SMNDC1-201ENST00000369592 GLIS2Q9BZE0 524 aaPredicted RBP25.74■■□□□ 1.71
SMNDC1-201ENST00000369592 LRRFIP2Q9Y608 721 aaKnown RBP25.74■■□□□ 1.71
SMNDC1-201ENST00000369592 PLIN1O60240 522 aa25.73■■□□□ 1.71
SMNDC1-201ENST00000369592 CTCFP49711 727 aaPredicted RBP25.72■■□□□ 1.71
SMNDC1-201ENST00000369592 MMP14P50281 582 aa25.72■■□□□ 1.71
SMNDC1-201ENST00000369592 CDC37L1Q7L3B6 337 aa25.72■■□□□ 1.71
SMNDC1-201ENST00000369592 ATG9AQ7Z3C6 839 aa25.72■■□□□ 1.71
SMNDC1-201ENST00000369592 FAM84BQ96KN1 310 aaPredicted RBP25.72■■□□□ 1.71
SMNDC1-201ENST00000369592 HDAC5Q9UQL6 1122 aa25.72■■□□□ 1.71
SMNDC1-201ENST00000369592 EYA2O00167 538 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 PDE8BO95263 885 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 GTF2IP78347 998 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 RBM26Q5T8P6 1007 aaKnown RBP25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 ZKSCAN2Q63HK3 967 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 ZNF804AQ7Z570 1209 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 CERS5Q8N5B7 392 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 TDRD7Q8NHU6 1098 aaKnown RBP25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 FRAT1Q92837 279 aaPredicted RBP25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 MYOZ2Q9NPC6 264 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 FBXO3Q9UK99 471 aa25.71■■□□□ 1.71
SMNDC1-201ENST00000369592 ASTN2O75129 1339 aaPredicted RBP25.7■■□□□ 1.71
SMNDC1-201ENST00000369592 RASSF10A6NK89 507 aa25.7■■□□□ 1.7
SMNDC1-201ENST00000369592 GNAI3P08754 354 aa25.7■■□□□ 1.7
SMNDC1-201ENST00000369592 FGFR2P21802 821 aa25.7■■□□□ 1.7
SMNDC1-201ENST00000369592 FKBP1AP62942 108 aaKnown RBP25.7■■□□□ 1.7
SMNDC1-201ENST00000369592 MTX1Q13505 466 aa25.7■■□□□ 1.7
SMNDC1-201ENST00000369592 FBXO33Q7Z6M2 555 aa25.7■■□□□ 1.7
SMNDC1-201ENST00000369592 FAM205AQ6ZU69 1335 aa25.69■■□□□ 1.7
SMNDC1-201ENST00000369592 METTL24Q5JXM2 366 aa25.69■■□□□ 1.7
SMNDC1-201ENST00000369592 ZBED3Q96IU2 234 aaPredicted RBP25.69■■□□□ 1.7
SMNDC1-201ENST00000369592 CIAO1O76071 339 aa25.68■■□□□ 1.7
SMNDC1-201ENST00000369592 SASH1O94885 1247 aa25.68■■□□□ 1.7
SMNDC1-201ENST00000369592 USP48Q86UV5 1035 aa25.68■■□□□ 1.7
SMNDC1-201ENST00000369592 TMEM57Q8N5G2 664 aa25.68■■□□□ 1.7
SMNDC1-201ENST00000369592 CLUAP1Q96AJ1 413 aa25.68■■□□□ 1.7
SMNDC1-201ENST00000369592 COPRSQ9NQ92 184 aa25.68■■□□□ 1.7
SMNDC1-201ENST00000369592 GYG1P46976 350 aa25.67■■□□□ 1.7
SMNDC1-201ENST00000369592 SCARF1Q14162 830 aa25.67■■□□□ 1.7
SMNDC1-201ENST00000369592 DLK2Q6UY11 383 aa25.67■■□□□ 1.7
SMNDC1-201ENST00000369592 HIBADHP31937 336 aaKnown RBP25.66■■□□□ 1.7
SMNDC1-201ENST00000369592 LBX1P52954 281 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms