RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 STK11IPQ8N1F8 1099 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 NSUN7Q8NE18 718 aaKnown RBP13.56□□□□□ -0.24
RAB39B-201ENST00000369454 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
RAB39B-201ENST00000369454 CTDNEP1O95476 244 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 FUCA2Q9BTY2 467 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
RAB39B-201ENST00000369454 MRC1P22897 1456 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 ZNF500O60304 480 aaPredicted RBP13.55□□□□□ -0.24
RAB39B-201ENST00000369454 ITGA6P23229 1130 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 ISCA1Q9BUE6 129 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 TRMT112Q9UI30 125 aaKnown RBP13.55□□□□□ -0.24
RAB39B-201ENST00000369454 STARD3NLO95772 234 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 RESTQ13127 1097 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 ZBTB1Q9Y2K1 713 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 DCCP43146 1447 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 JCADQ9P266 1359 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 RXRAP19793 462 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 DRC7Q8IY82 874 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 FAM13BQ9NYF5 915 aa13.55□□□□□ -0.24
RAB39B-201ENST00000369454 FGAP02671 866 aa13.54□□□□□ -0.24
RAB39B-201ENST00000369454 POLR3DP05423 398 aaPredicted RBP13.54□□□□□ -0.24
RAB39B-201ENST00000369454 HSP90AA2PQ14568 343 aaPredicted RBP13.54□□□□□ -0.24
RAB39B-201ENST00000369454 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
RAB39B-201ENST00000369454 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
RAB39B-201ENST00000369454 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
RAB39B-201ENST00000369454 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
RAB39B-201ENST00000369454 SOS2Q07890 1332 aaPredicted RBP13.54□□□□□ -0.24
RAB39B-201ENST00000369454 MRVI1Q9Y6F6 885 aa13.54□□□□□ -0.24
RAB39B-201ENST00000369454 PFKFB2O60825 505 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
RAB39B-201ENST00000369454 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 UQCRHP07919 91 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
RAB39B-201ENST00000369454 CCDC144CPQ8IYA2 1237 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
RAB39B-201ENST00000369454 ME1P48163 572 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 ALDH8A1Q9H2A2 487 aaPredicted RBP13.53□□□□□ -0.24
RAB39B-201ENST00000369454 AKAP2Q9Y2D5 859 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 PALLDQ8WX93 1383 aa13.53□□□□□ -0.24
RAB39B-201ENST00000369454 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.24
RAB39B-201ENST00000369454 IMMTQ16891 758 aaKnown RBP13.52□□□□□ -0.24
RAB39B-201ENST00000369454 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.24
RAB39B-201ENST00000369454 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.24
RAB39B-201ENST00000369454 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.24
RAB39B-201ENST00000369454 SLC4A9Q96Q91 983 aa13.52□□□□□ -0.24
RAB39B-201ENST00000369454 GPR108Q9NPR9 543 aa13.52□□□□□ -0.24
RAB39B-201ENST00000369454 KLF18A0A0U1RQI7 1052 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 GPAA1O43292 621 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 MCAMP43121 646 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 EXOSC10Q01780 885 aaKnown RBP13.52□□□□□ -0.25
RAB39B-201ENST00000369454 INCENPQ9NQS7 918 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 GOLGA8BA8MQT2 603 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 PRC1O43663 620 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 CIAO1O76071 339 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 RALYLQ86SE5 291 aaKnown RBP13.52□□□□□ -0.25
RAB39B-201ENST00000369454 NLRP10Q86W26 655 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 FAM200AQ8TCP9 573 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 TSC1Q92574 1164 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 CBX8Q9HC52 389 aa13.52□□□□□ -0.25
RAB39B-201ENST00000369454 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
RAB39B-201ENST00000369454 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
RAB39B-201ENST00000369454 TTLL11Q8NHH1 800 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 KCPQ6ZWJ8 1503 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 ELP1O95163 1332 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 CPLX1O14810 134 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 FOXP2O15409 715 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
RAB39B-201ENST00000369454 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
RAB39B-201ENST00000369454 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 ZNF213O14771 459 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 PHKA1P46020 1223 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 ZNF165P49910 485 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 SMARCC2Q8TAQ2 1214 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
RAB39B-201ENST00000369454 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 NOLC1Q14978 699 aaKnown RBP eCLIP13.5□□□□□ -0.25
RAB39B-201ENST00000369454 CLSTN2Q9H4D0 955 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 GLI3P10071 1580 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 TPM2P07951 284 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 PTGS1P23219 599 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 MCM5P33992 734 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 DZIP3Q86Y13 1208 aaKnown RBP13.5□□□□□ -0.25
RAB39B-201ENST00000369454 GOLPH3LQ9H4A5 285 aa13.5□□□□□ -0.25
RAB39B-201ENST00000369454 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
RAB39B-201ENST00000369454 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
RAB39B-201ENST00000369454 IQSEC3Q9UPP2 1182 aaPredicted RBP13.5□□□□□ -0.25
RAB39B-201ENST00000369454 PYCARDQ9ULZ3 195 aa13.49□□□□□ -0.25
RAB39B-201ENST00000369454 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
RAB39B-201ENST00000369454 CTSWP56202 376 aa13.49□□□□□ -0.25
RAB39B-201ENST00000369454 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms