RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 BCAMP50895 628 aa17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 COL9A3Q14050 684 aaPredicted RBP17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 RFX7Q2KHR2 1363 aa17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 ARID4AP29374 1257 aaPredicted RBP17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
HMGCS2-201ENST00000369406 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 PDGFDQ9GZP0 370 aaPredicted RBP17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 SLC5A1P13866 664 aa17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
HMGCS2-201ENST00000369406 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
HMGCS2-201ENST00000369406 SNX21Q969T3 373 aa17.03■□□□□ 0.32
HMGCS2-201ENST00000369406 ZNF512BQ96KM6 892 aaPredicted RBP17.03■□□□□ 0.32
HMGCS2-201ENST00000369406 HMG20BQ9P0W2 317 aa17.03■□□□□ 0.32
HMGCS2-201ENST00000369406 HIP1O00291 1037 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 GYG1P46976 350 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 LAMA4Q16363 1823 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 M0R2C6 588 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 IL17RAQ96F46 866 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 IQSEC3Q9UPP2 1182 aaPredicted RBP17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 SNX14Q9Y5W7 946 aa17.02■□□□□ 0.32
HMGCS2-201ENST00000369406 EIF5BO60841 1220 aaKnown RBP17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 BECN1Q14457 450 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 RABEP1Q15276 862 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 ZMYM1Q5SVZ6 1142 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 MAST3O60307 1309 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 RBM8AQ9Y5S9 174 aaKnown RBP17.01■□□□□ 0.31
HMGCS2-201ENST00000369406 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
HMGCS2-201ENST00000369406 MMP10P09238 476 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 GRAPQ13588 217 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 SLC15A2Q16348 729 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
HMGCS2-201ENST00000369406 TXNRD3Q86VQ6 643 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
HMGCS2-201ENST00000369406 MAP4K1Q92918 833 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 OSBP2Q969R2 916 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
HMGCS2-201ENST00000369406 ST5P78524 1137 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 NECTIN1Q15223 517 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
HMGCS2-201ENST00000369406 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
HMGCS2-201ENST00000369406 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 ADCK5Q3MIX3 580 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 SPATA5Q8NB90 893 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 SLKQ9H2G2 1235 aaPredicted RBP16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 FOXP2O15409 715 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 CPA1P15085 419 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 HSCBQ8IWL3 235 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 GPR101Q96P66 508 aaPredicted RBP16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 WWC3Q9ULE0 1092 aa16.99■□□□□ 0.31
HMGCS2-201ENST00000369406 EPB41L2O43491 1005 aaKnown RBP16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 FAM84BQ96KN1 310 aaPredicted RBP16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 KLRG2A4D1S0 409 aaPredicted RBP16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 UBE4AQ14139 1066 aa16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 KCNB2Q92953 911 aa16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 PUS7LQ9H0K6 701 aaKnown RBP16.98■□□□□ 0.31
HMGCS2-201ENST00000369406 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
HMGCS2-201ENST00000369406 MCCP23508 829 aa16.97■□□□□ 0.31
HMGCS2-201ENST00000369406 ANAPC15P60006 121 aa16.97■□□□□ 0.31
HMGCS2-201ENST00000369406 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
HMGCS2-201ENST00000369406 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
HMGCS2-201ENST00000369406 SLC27A2O14975 620 aa16.96■□□□□ 0.31
HMGCS2-201ENST00000369406 NEK4P51957 841 aa16.96■□□□□ 0.31
HMGCS2-201ENST00000369406 FLAD1Q8NFF5 587 aa16.96■□□□□ 0.31
HMGCS2-201ENST00000369406 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
HMGCS2-201ENST00000369406 CHD4Q14839 1912 aa16.96■□□□□ 0.31
HMGCS2-201ENST00000369406 TCRBV5S4A2TA0A5A2 114 aa16.96■□□□□ 0.3
HMGCS2-201ENST00000369406 K7ELQ4 463 aaPredicted RBP16.96■□□□□ 0.3
HMGCS2-201ENST00000369406 OLFM4Q6UX06 510 aa16.96■□□□□ 0.3
HMGCS2-201ENST00000369406 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.3
HMGCS2-201ENST00000369406 IDH1O75874 414 aaKnown RBP16.95■□□□□ 0.3
HMGCS2-201ENST00000369406 HOXA10P31260 410 aaPredicted RBP16.95■□□□□ 0.3
HMGCS2-201ENST00000369406 ADD2P35612 726 aa16.95■□□□□ 0.3
HMGCS2-201ENST00000369406 GPSM2P81274 684 aa16.95■□□□□ 0.3
HMGCS2-201ENST00000369406 ERICH6Q7L0X2 663 aa16.95■□□□□ 0.3
HMGCS2-201ENST00000369406 FBXO33Q7Z6M2 555 aa16.95■□□□□ 0.3
HMGCS2-201ENST00000369406 PDE6AP16499 860 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 SLC9C2Q5TAH2 1124 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 WASHC4Q2M389 1173 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 ANKRD2Q9GZV1 360 aa16.94■□□□□ 0.3
HMGCS2-201ENST00000369406 ZNF532Q9HCE3 1301 aa16.93■□□□□ 0.3
HMGCS2-201ENST00000369406 RPAP1Q9BWH6 1393 aaPredicted RBP16.93■□□□□ 0.3
HMGCS2-201ENST00000369406 HSPD1P10809 573 aaKnown RBP16.93■□□□□ 0.3
HMGCS2-201ENST00000369406 RBM17Q96I25 401 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms