RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 C6orf50Q9HD87 102 aa14.02□□□□□ -0.16
TPR-201ENST00000367478 MRVI1Q9Y6F6 885 aa14.02□□□□□ -0.16
TPR-201ENST00000367478 HECW1Q76N89 1606 aa14.02□□□□□ -0.16
TPR-201ENST00000367478 CETN3O15182 167 aa14.02□□□□□ -0.16
TPR-201ENST00000367478 VWA3BQ502W6 1294 aa14.02□□□□□ -0.16
TPR-201ENST00000367478 RAB11FIP4Q86YS3 637 aa14.02□□□□□ -0.16
TPR-201ENST00000367478 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
TPR-201ENST00000367478 CCDC38Q502W7 563 aa14.02□□□□□ -0.17
TPR-201ENST00000367478 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
TPR-201ENST00000367478 CRNKL1Q9BZJ0 848 aaKnown RBP14.02□□□□□ -0.17
TPR-201ENST00000367478 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.17
TPR-201ENST00000367478 UTP11Q9Y3A2 253 aaKnown RBP14.02□□□□□ -0.17
TPR-201ENST00000367478 ECHDC1Q9NTX5 307 aa14.02□□□□□ -0.17
TPR-201ENST00000367478 GAPVD1Q14C86 1478 aa14.02□□□□□ -0.17
TPR-201ENST00000367478 ATL3Q6DD88 541 aa14.02□□□□□ -0.17
TPR-201ENST00000367478 STK10O94804 968 aaKnown RBP14.01□□□□□ -0.17
TPR-201ENST00000367478 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
TPR-201ENST00000367478 NBPF8Q3BBV2 869 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 MCUR1Q96AQ8 359 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 TMOD3Q9NYL9 352 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 TRIM14Q14142 442 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 GKAP1Q5VSY0 366 aaPredicted RBP14.01□□□□□ -0.17
TPR-201ENST00000367478 RUFY4Q6ZNE9 571 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 AFAP1L1Q8TED9 768 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 SLC26A6Q9BXS9 759 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 ZKSCAN5Q9Y2L8 839 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 PRR16Q569H4 304 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 PLCB1Q9NQ66 1216 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 RPL13P26373 211 aaKnown RBP14.01□□□□□ -0.17
TPR-201ENST00000367478 WTAPQ15007 396 aa14.01□□□□□ -0.17
TPR-201ENST00000367478 PPFIA1Q13136 1202 aa14□□□□□ -0.17
TPR-201ENST00000367478 HAUS8Q9BT25 410 aa14□□□□□ -0.17
TPR-201ENST00000367478 NCOA2Q15596 1464 aa14□□□□□ -0.17
TPR-201ENST00000367478 FAM13AO94988 1023 aa14□□□□□ -0.17
TPR-201ENST00000367478 TTLL12Q14166 644 aaPredicted RBP14□□□□□ -0.17
TPR-201ENST00000367478 TEX13AQ9BXU3 409 aaPredicted RBP14□□□□□ -0.17
TPR-201ENST00000367478 SYNJ2O15056 1496 aa14□□□□□ -0.17
TPR-201ENST00000367478 HSPA1LP34931 641 aa14□□□□□ -0.17
TPR-201ENST00000367478 UBLCP1Q8WVY7 318 aaPredicted RBP14□□□□□ -0.17
TPR-201ENST00000367478 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
TPR-201ENST00000367478 TFIP11Q9UBB9 837 aaKnown RBP14□□□□□ -0.17
TPR-201ENST00000367478 CASKIN1Q8WXD9 1431 aa14□□□□□ -0.17
TPR-201ENST00000367478 ESR2Q92731 530 aa14□□□□□ -0.17
TPR-201ENST00000367478 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
TPR-201ENST00000367478 ERCC5P28715 1186 aaPredicted RBP14□□□□□ -0.17
TPR-201ENST00000367478 LGSNQ5TDP6 509 aa14□□□□□ -0.17
TPR-201ENST00000367478 ZBTB43O43298 467 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 SLC8A3P57103 927 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 CABP1Q9NZU7 370 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 WHAMMP3Q1A5X7 153 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 IFIT1BQ5T764 474 aaKnown RBP13.99□□□□□ -0.17
TPR-201ENST00000367478 SMARCA4P51532 1647 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 DNAJC8O75937 253 aaPredicted RBP13.99□□□□□ -0.17
TPR-201ENST00000367478 RSPH3Q86UC2 560 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 SUDS3Q9H7L9 328 aaPredicted RBP13.99□□□□□ -0.17
TPR-201ENST00000367478 CCDC170Q8IYT3 715 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 TERF1P54274 439 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 ZNF365Q70YC5 407 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 RNF10Q8N5U6 811 aaKnown RBP13.99□□□□□ -0.17
TPR-201ENST00000367478 INPP5BP32019 993 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 ITIH3Q06033 890 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 CCDC25Q86WR0 208 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 IFT20Q8IY31 132 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 UBL4BQ8N7F7 174 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 IFT81Q8WYA0 676 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
TPR-201ENST00000367478 CALM1P0DP23 149 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 CALM2P0DP24 149 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 CALM3P0DP25 149 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
TPR-201ENST00000367478 UQCRFS1P1P0C7P4 283 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 I3L4J1 428 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 CLNS1AP54105 237 aaKnown RBP13.98□□□□□ -0.17
TPR-201ENST00000367478 UBXN1Q04323 297 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 ATP2A3Q93084 1043 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 PTGS1P23219 599 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 ASIC1P78348 528 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 RNF216Q9NWF9 866 aaPredicted RBP13.98□□□□□ -0.17
TPR-201ENST00000367478 E7EVH7 732 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 RTN1Q16799 776 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 FRMD4BQ9Y2L6 1034 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 RTL1A6NKG5 1358 aa13.98□□□□□ -0.17
TPR-201ENST00000367478 EFCAB5A4FU69 1503 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 SMAP1Q8IYB5 467 aaPredicted RBP13.97□□□□□ -0.17
TPR-201ENST00000367478 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
TPR-201ENST00000367478 NDUFAB1O14561 156 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 PPP1R12CQ9BZL4 782 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 FAN1Q9Y2M0 1017 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 HAUS7Q99871 368 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 Q9H521 79 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 GIMAP6Q6P9H5 292 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 TBC1D9Q6ZT07 1266 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 NSD3Q9BZ95 1437 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 SPDYE3A6NKU9 549 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms