RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 KDM6BO15054 1643 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 MAST1Q9Y2H9 1570 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 AKR1B10O60218 316 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 MCM6Q14566 821 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
RD3-201ENST00000367002 DHX58Q96C10 678 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 JADE2Q9NQC1 790 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 SPAG1Q07617 926 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 VPS36Q86VN1 386 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 SBNO1A3KN83 1393 aa13.13□□□□□ -0.31
RD3-201ENST00000367002 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 SYT10Q6XYQ8 523 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 LDHCP07864 332 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
RD3-201ENST00000367002 NDUFB9Q9Y6M9 179 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
RD3-201ENST00000367002 STX17P56962 302 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
RD3-201ENST00000367002 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 A0A1B0GUL7 405 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 LIG1P18858 919 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 USP8P40818 1118 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
RD3-201ENST00000367002 KIF20AO95235 890 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 BAG3O95817 575 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 SSH3Q8TE77 659 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 SUCLG2Q96I99 432 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
RD3-201ENST00000367002 EYA2O00167 538 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 HLTFQ14527 1009 aaKnown RBP eCLIP13.11□□□□□ -0.31
RD3-201ENST00000367002 TCERG1LQ5VWI1 586 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
RD3-201ENST00000367002 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
RD3-201ENST00000367002 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
RD3-201ENST00000367002 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
RD3-201ENST00000367002 TUBB4AP04350 444 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 SRRTQ9BXP5 876 aaKnown RBP13.1□□□□□ -0.31
RD3-201ENST00000367002 ANTXR1Q9H6X2 564 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 CBX8Q9HC52 389 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 CCDC175P0C221 793 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 RMND1Q9NWS8 449 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 ABCC2Q92887 1545 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 GCC2Q8IWJ2 1684 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 FAM89AQ96GI7 184 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 HELLSQ9NRZ9 838 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.1□□□□□ -0.31
RD3-201ENST00000367002 CTAGE15A4D2H0 777 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 MYO1BO43795 1136 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 JAK2O60674 1132 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 CTAGE8P0CG41 777 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 STAT6P42226 847 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 MYL5Q02045 173 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 NAA16Q6N069 864 aaPredicted RBP13.1□□□□□ -0.31
RD3-201ENST00000367002 CTAGE6Q86UF2 777 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 CTAGE4Q8IX94 777 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 KBTBD3Q8NAB2 608 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 MIGA1Q8NAN2 632 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
RD3-201ENST00000367002 ALS2CR12Q96Q35 445 aa13.1□□□□□ -0.31
RD3-201ENST00000367002 UTP14AQ9BVJ6 771 aaKnown RBP13.1□□□□□ -0.31
RD3-201ENST00000367002 CCDC178Q5BJE1 867 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 SPECC1Q5M775 1068 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 CLSTN2Q9H4D0 955 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 KIF24Q5T7B8 1368 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
RD3-201ENST00000367002 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
RD3-201ENST00000367002 NBPF6Q5VWK0 638 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 CTR9Q6PD62 1173 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 ANKRD18AQ8IVF6 992 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 FAM114A1Q8IWE2 563 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
RD3-201ENST00000367002 NBPF4Q96M43 638 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 IRS4O14654 1257 aaPredicted RBP13.09□□□□□ -0.31
RD3-201ENST00000367002 PSMA7O14818 248 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
RD3-201ENST00000367002 ME3Q16798 604 aa13.09□□□□□ -0.31
RD3-201ENST00000367002 LLPHQ9BRT6 129 aaKnown RBP13.09□□□□□ -0.31
RD3-201ENST00000367002 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.31
RD3-201ENST00000367002 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.31
RD3-201ENST00000367002 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.31
RD3-201ENST00000367002 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.31
RD3-201ENST00000367002 LZTFL1Q9NQ48 299 aa13.08□□□□□ -0.31
RD3-201ENST00000367002 TMOD2Q9NZR1 351 aa13.08□□□□□ -0.31
RD3-201ENST00000367002 TRPM2O94759 1503 aa13.08□□□□□ -0.31
RD3-201ENST00000367002 CFAP65Q6ZU64 1925 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms