RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 OGFOD1Q8N543 542 aa11.64□□□□□ -0.55
MRPL55-216ENST00000366744 AGBL3Q8NEM8 1001 aa11.64□□□□□ -0.55
MRPL55-216ENST00000366744 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
MRPL55-216ENST00000366744 TAF5LO75529 589 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 BCAR3O75815 825 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 TRIM27P14373 513 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 MAP1SQ66K74 1059 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-216ENST00000366744 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
MRPL55-216ENST00000366744 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 CNTROBQ8N137 903 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 ANKRD44Q8N8A2 993 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
MRPL55-216ENST00000366744 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
MRPL55-216ENST00000366744 LRRFIP2Q9Y608 721 aaKnown RBP11.63□□□□□ -0.55
MRPL55-216ENST00000366744 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
MRPL55-216ENST00000366744 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
MRPL55-216ENST00000366744 MS4A1P11836 297 aa11.62□□□□□ -0.55
MRPL55-216ENST00000366744 KIF4BQ2VIQ3 1234 aa11.62□□□□□ -0.55
MRPL55-216ENST00000366744 TBC1D10BQ4KMP7 808 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-216ENST00000366744 STRIP1Q5VSL9 837 aa11.62□□□□□ -0.55
MRPL55-216ENST00000366744 ZC3H15Q8WU90 426 aaKnown RBP11.62□□□□□ -0.55
MRPL55-216ENST00000366744 KAZALD1Q96I82 304 aa11.62□□□□□ -0.55
MRPL55-216ENST00000366744 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
MRPL55-216ENST00000366744 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 TMEM88BA6NKF7 163 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
MRPL55-216ENST00000366744 MMP14P50281 582 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 UBE4AQ14139 1066 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 PUM3Q15397 648 aaKnown RBP11.61□□□□□ -0.55
MRPL55-216ENST00000366744 CAVIN4Q5BKX8 364 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 C15orf52Q6ZUT6 534 aaKnown RBP11.61□□□□□ -0.55
MRPL55-216ENST00000366744 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 TRPM4Q8TD43 1214 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
MRPL55-216ENST00000366744 MEIS3Q99687 375 aa11.61□□□□□ -0.55
MRPL55-216ENST00000366744 ABT1Q9ULW3 272 aaKnown RBP11.61□□□□□ -0.55
MRPL55-216ENST00000366744 GNAI2P04899 355 aa11.6□□□□□ -0.55
MRPL55-216ENST00000366744 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
MRPL55-216ENST00000366744 KLRK1P26718 216 aa11.6□□□□□ -0.55
MRPL55-216ENST00000366744 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
MRPL55-216ENST00000366744 TTLL5Q6EMB2 1281 aa11.6□□□□□ -0.55
MRPL55-216ENST00000366744 SAMD7Q7Z3H4 446 aa11.6□□□□□ -0.55
MRPL55-216ENST00000366744 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
MRPL55-216ENST00000366744 KCNQ5Q9NR82 932 aa11.6□□□□□ -0.55
MRPL55-216ENST00000366744 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
MRPL55-216ENST00000366744 EYA2O00167 538 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 SLC5A1P13866 664 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 GTF2IP78347 998 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 HTRA3P83110 453 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 DACT2Q5SW24 774 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
MRPL55-216ENST00000366744 CDC37L1Q7L3B6 337 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 SULF1Q8IWU6 871 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 KLRG1Q96E93 195 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
MRPL55-216ENST00000366744 SIL1Q9H173 461 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 ZNF408Q9H9D4 720 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 CD209Q9NNX6 404 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
MRPL55-216ENST00000366744 SHTN1A0MZ66 631 aa11.58□□□□□ -0.56
MRPL55-216ENST00000366744 WTIPA6NIX2 430 aaPredicted RBP11.58□□□□□ -0.56
MRPL55-216ENST00000366744 CIAO1O76071 339 aa11.58□□□□□ -0.56
MRPL55-216ENST00000366744 PDE8BO95263 885 aa11.58□□□□□ -0.56
MRPL55-216ENST00000366744 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
MRPL55-216ENST00000366744 HIBADHP31937 336 aaKnown RBP11.58□□□□□ -0.56
MRPL55-216ENST00000366744 ZNF280AP59817 542 aaPredicted RBP11.58□□□□□ -0.56
MRPL55-216ENST00000366744 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
MRPL55-216ENST00000366744 TMEM57Q8N5G2 664 aa11.58□□□□□ -0.56
MRPL55-216ENST00000366744 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
MRPL55-216ENST00000366744 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
MRPL55-216ENST00000366744 PAPPA2Q9BXP8 1791 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 SNAP23O00161 211 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 MYO1BO43795 1136 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 IL1R1P14778 569 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 IL15P40933 162 aaPredicted RBP11.57□□□□□ -0.56
MRPL55-216ENST00000366744 GYG1P46976 350 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 KIAA0825Q8IV33 1275 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 GLIS2Q9BZE0 524 aaPredicted RBP11.57□□□□□ -0.56
MRPL55-216ENST00000366744 CEP126Q9P2H0 1117 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 COL1A1P02452 1464 aaPredicted RBP11.57□□□□□ -0.56
MRPL55-216ENST00000366744 THSD7BQ9C0I4 1608 aa11.57□□□□□ -0.56
MRPL55-216ENST00000366744 CNTNAP1P78357 1384 aa11.56□□□□□ -0.56
MRPL55-216ENST00000366744 TRAF5O00463 557 aa11.56□□□□□ -0.56
MRPL55-216ENST00000366744 CELF2O95319 508 aaKnown RBP11.56□□□□□ -0.56
MRPL55-216ENST00000366744 PTPN12Q05209 780 aaKnown RBP11.56□□□□□ -0.56
MRPL55-216ENST00000366744 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
MRPL55-216ENST00000366744 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
MRPL55-216ENST00000366744 TBC1D22AQ8WUA7 517 aa11.56□□□□□ -0.56
MRPL55-216ENST00000366744 LPIN2Q92539 896 aa11.56□□□□□ -0.56
MRPL55-216ENST00000366744 CHMP4BQ9H444 224 aaKnown RBP11.56□□□□□ -0.56
MRPL55-216ENST00000366744 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
MRPL55-216ENST00000366744 MKRN1Q9UHC7 482 aaKnown RBP11.56□□□□□ -0.56
MRPL55-216ENST00000366744 PGAP2Q9UHJ9 254 aa11.56□□□□□ -0.56
MRPL55-216ENST00000366744 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms