RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 HOXB7P09629 217 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 RLBP1P12271 317 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 CTNNA2P26232 953 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 STAT6P42226 847 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 MRPL12P52815 198 aaKnown RBP11.8□□□□□ -0.52
ZNF548-202ENST00000366197 MAP9Q49MG5 647 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 HOOK3Q86VS8 718 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 CNBD1Q8NA66 436 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 BICD1Q96G01 975 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 PIK3C2GO75747 1445 aa11.8□□□□□ -0.52
ZNF548-202ENST00000366197 LTKP29376 864 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 CASQ1P31415 396 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 PDCL2Q8N4E4 241 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 TRMT1Q9NXH9 659 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 CCNL1Q9UK58 526 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 TMCO5BA8MYB1 307 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 AKR1B10O60218 316 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 AFMP43652 599 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 NOP2P46087 812 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 SMC5Q8IY18 1101 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 MRPS27Q92552 414 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 DDX17Q92841 729 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 SPAG1Q07617 926 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 EYA2O00167 538 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 PER1O15534 1290 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
ZNF548-202ENST00000366197 ALS2CR12Q96Q35 445 aa11.79□□□□□ -0.52
ZNF548-202ENST00000366197 FERMT2Q96AC1 680 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 TIMM10P62072 90 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 RRAGBQ5VZM2 374 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 CTTNBP2Q8WZ74 1663 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 GOLGA6L9A6NEM1 432 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 CCDC172P0C7W6 258 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-202ENST00000366197 MCM3P25205 808 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 GIMAP6Q6P9H5 292 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
ZNF548-202ENST00000366197 DENND2AQ9ULE3 1009 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 PSMA7O14818 248 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 ADCY5O95622 1261 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 TNNT1P13805 278 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 GNA11P29992 359 aa11.78□□□□□ -0.52
ZNF548-202ENST00000366197 MARCKSP29966 332 aaPredicted RBP11.77□□□□□ -0.52
ZNF548-202ENST00000366197 FAM98CQ17RN3 349 aaKnown RBP11.77□□□□□ -0.52
ZNF548-202ENST00000366197 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.52
ZNF548-202ENST00000366197 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.52
ZNF548-202ENST00000366197 RAD50Q92878 1312 aa11.77□□□□□ -0.52
ZNF548-202ENST00000366197 RTL9Q8NET4 1388 aa11.77□□□□□ -0.52
ZNF548-202ENST00000366197 UVSSAQ2YD98 709 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 KRT79Q5XKE5 535 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 CREB3L3Q68CJ9 461 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 CHST3Q7LGC8 479 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 TCHPQ9BT92 498 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
ZNF548-202ENST00000366197 CCDC113Q9H0I3 377 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 TMEM2Q9UHN6 1383 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 IL13P35225 146 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 ASIC1P78348 528 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 SPECC1Q5M775 1068 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 G2E3Q7L622 706 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 DYDC1Q8WWB3 177 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
ZNF548-202ENST00000366197 TAOK3Q9H2K8 898 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 JAG2Q9Y219 1238 aa11.77□□□□□ -0.53
ZNF548-202ENST00000366197 A0A1B0GUL7 405 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 SPTLC2O15270 562 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 TNNI2P48788 182 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 GRM1Q13255 1194 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 CCDC171Q6TFL3 1326 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 DRC1Q96MC2 740 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 C16orf45Q96MC5 204 aaPredicted RBP11.76□□□□□ -0.53
ZNF548-202ENST00000366197 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
ZNF548-202ENST00000366197 KRT13P13646 458 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 ITGA6P23229 1130 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 UBASH3AP57075 661 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 PRPF4BQ13523 1007 aaKnown RBP11.76□□□□□ -0.53
ZNF548-202ENST00000366197 PDE8AO60658 829 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 F13A1P00488 732 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 A1BGP04217 495 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 CHMLP26374 656 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
ZNF548-202ENST00000366197 PLS1Q14651 629 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 CCDC97Q96F63 343 aaPredicted RBP11.76□□□□□ -0.53
ZNF548-202ENST00000366197 CTAGE1Q96RT6 745 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 CNPY2Q9Y2B0 182 aa11.76□□□□□ -0.53
ZNF548-202ENST00000366197 SHANK2Q9UPX8 1470 aa11.75□□□□□ -0.53
ZNF548-202ENST00000366197 EDC4Q6P2E9 1401 aaKnown RBP11.75□□□□□ -0.53
ZNF548-202ENST00000366197 CHL1O00533 1208 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms