RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 NECTIN1Q15223 517 aa15.77■□□□□ 0.12
SGMS1-202ENST00000361781 MYL10Q9BUA6 226 aa15.77■□□□□ 0.12
SGMS1-202ENST00000361781 DDX21Q9NR30 783 aaKnown RBP eCLIP15.77■□□□□ 0.12
SGMS1-202ENST00000361781 CYP21A2P08686 494 aa15.77■□□□□ 0.11
SGMS1-202ENST00000361781 KCNG4Q8TDN1 519 aa15.77■□□□□ 0.11
SGMS1-202ENST00000361781 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.11
SGMS1-202ENST00000361781 SASH1O94885 1247 aa15.77■□□□□ 0.11
SGMS1-202ENST00000361781 PLCD3Q8N3E9 789 aa15.77■□□□□ 0.11
SGMS1-202ENST00000361781 PGBD1Q96JS3 809 aa15.77■□□□□ 0.11
SGMS1-202ENST00000361781 TNRQ92752 1358 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 RPAP1Q9BWH6 1393 aaPredicted RBP15.76■□□□□ 0.11
SGMS1-202ENST00000361781 ABCC3O15438 1527 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 TAF5LO75529 589 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 GPHNQ9NQX3 736 aaPredicted RBP15.76■□□□□ 0.11
SGMS1-202ENST00000361781 CWC15Q9P013 229 aaKnown RBP15.76■□□□□ 0.11
SGMS1-202ENST00000361781 CFAP74Q9C0B2 1584 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 CDKL5O76039 1030 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 JAKMIP3Q5VZ66 844 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.76■□□□□ 0.11
SGMS1-202ENST00000361781 PHKBQ93100 1093 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 IQSEC3Q9UPP2 1182 aaPredicted RBP15.76■□□□□ 0.11
SGMS1-202ENST00000361781 PLEKHG3A1L390 1219 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 EVCP57679 992 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 NCOA7Q8NI08 942 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
SGMS1-202ENST00000361781 ZNF202O95125 648 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 ATF3P18847 181 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 FANCCQ00597 558 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 TMEM67Q5HYA8 995 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 NAPBQ9H115 298 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
SGMS1-202ENST00000361781 DHX8Q14562 1220 aaKnown RBP15.75■□□□□ 0.11
SGMS1-202ENST00000361781 SLC4A8Q2Y0W8 1093 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 LDHAL6AQ6ZMR3 332 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
SGMS1-202ENST00000361781 DBNLQ9UJU6 430 aaKnown RBP15.75■□□□□ 0.11
SGMS1-202ENST00000361781 SLC12A7Q9Y666 1083 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 MARCH6O60337 910 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 GCP02774 474 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 NDUFA8P51970 172 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 DPCR1Q3MIW9 517 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 HELBQ8NG08 1087 aaPredicted RBP15.75■□□□□ 0.11
SGMS1-202ENST00000361781 ARFGAP3Q9NP61 516 aa15.75■□□□□ 0.11
SGMS1-202ENST00000361781 SNRPA1P09661 255 aaKnown RBP15.74■□□□□ 0.11
SGMS1-202ENST00000361781 DNA2P51530 1060 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 GCKRQ14397 625 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 SMARCE1Q969G3 411 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 ZKSCAN3Q9BRR0 538 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 RAD21O60216 631 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 IFIT5Q13325 482 aaKnown RBP15.74■□□□□ 0.11
SGMS1-202ENST00000361781 TAF3Q5VWG9 929 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 TRMT44Q8IYL2 757 aaKnown RBP15.74■□□□□ 0.11
SGMS1-202ENST00000361781 TMEM87AQ8NBN3 555 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 UBAC1Q9BSL1 405 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 PCDHA7Q9UN72 937 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 ROBO2Q9HCK4 1378 aa15.74■□□□□ 0.11
SGMS1-202ENST00000361781 KIF5CO60282 957 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 TDRD7Q8NHU6 1098 aaKnown RBP15.73■□□□□ 0.11
SGMS1-202ENST00000361781 IP6K1Q92551 441 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 ZNF496Q96IT1 587 aaPredicted RBP15.73■□□□□ 0.11
SGMS1-202ENST00000361781 CWC25Q9NXE8 425 aaPredicted RBP15.73■□□□□ 0.11
SGMS1-202ENST00000361781 RHOXF2BP0C7M4 288 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 XBP1P17861 261 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 RHOXF2Q9BQY4 288 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 SLC9C2Q5TAH2 1124 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 KIF6Q6ZMV9 814 aa15.73■□□□□ 0.11
SGMS1-202ENST00000361781 POLA2Q14181 598 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 LRP2BPQ9P2M1 347 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 CLIC4Q9Y696 253 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 A0A1B0GUL7 405 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 E7EWF7 191 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 ZNF827Q17R98 1081 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 DESI2Q9BSY9 194 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 CDK12Q9NYV4 1490 aaPredicted RBP15.72■□□□□ 0.11
SGMS1-202ENST00000361781 ERLIN1O75477 346 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 NEK11Q8NG66 645 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 DACH1Q9UI36 760 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
SGMS1-202ENST00000361781 ZBTB22O15209 634 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
SGMS1-202ENST00000361781 TOB2Q14106 344 aaPredicted RBP15.71■□□□□ 0.11
SGMS1-202ENST00000361781 CCDC70Q6NSX1 233 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 FBXO38Q6PIJ6 1188 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 C10orf67Q8IYJ2 551 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 NUP88Q99567 741 aaPredicted RBP15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ACBD3Q9H3P7 528 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 PRDM11Q9NQV5 511 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ST7Q9NRC1 585 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 SPTLC3Q9NUV7 552 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ARHGEF10O15013 1369 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ZBTB43O43298 467 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ADKP55263 362 aaKnown RBP15.71■□□□□ 0.11
SGMS1-202ENST00000361781 PNOCQ13519 176 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 ORAI2Q96SN7 254 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 MPHOSPH8Q99549 860 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 KIAA1468Q9P260 1216 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 CHD1O14646 1710 aa15.71■□□□□ 0.11
SGMS1-202ENST00000361781 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms