RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 KDM3BQ7LBC6 1761 aa3.46□□□□□ -1.85
LTN1-201ENST00000361371 DYNLL1P63167 89 aaKnown RBP3.46□□□□□ -1.85
LTN1-201ENST00000361371 TTC39AQ5SRH9 613 aa3.46□□□□□ -1.85
LTN1-201ENST00000361371 CCDC171Q6TFL3 1326 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 C5P01031 1676 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 IGHMBP2P38935 993 aaKnown RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 DIXDC1Q155Q3 683 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 LPIN2Q92539 896 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 POLLQ9UGP5 575 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 RAD50Q92878 1312 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 FOXD4L6Q3SYB3 417 aaPredicted RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 FOXD4L3Q6VB84 417 aaPredicted RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 ZNF652Q9Y2D9 606 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 UBE2Q2LH0YL09 131 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 PDE6AP16499 860 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 JAKMIP1Q96N16 626 aaKnown RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 ARMT1Q9H993 441 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 UPF2Q9HAU5 1272 aaKnown RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 RNF113AO15541 343 aaKnown RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 HSPD1P10809 573 aaKnown RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 SSFA2P28290 1259 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 CREB3L3Q68CJ9 461 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 EPB41L4AQ9HCS5 686 aaPredicted RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 ZDHHC9Q9Y397 364 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 COL1A1P02452 1464 aaPredicted RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 SLC27A2O14975 620 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 PRDM1O75626 825 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 R3HDM1Q15032 1099 aaKnown RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 DOK7Q18PE1 504 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 CCDC158Q5M9N0 1113 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 ZMYM1Q5SVZ6 1142 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 FAM173BQ6P4H8 233 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 LCORLQ8N3X6 602 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 SPATA5Q8NB90 893 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 TMX3Q96JJ7 454 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 NBPF3Q9H094 633 aa3.46□□□□□ -1.86
LTN1-201ENST00000361371 BSDC1Q9NW68 430 aaPredicted RBP3.46□□□□□ -1.86
LTN1-201ENST00000361371 ZNF532Q9HCE3 1301 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 KDM4AO75164 1064 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 AK2P54819 239 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 RUFY3Q7L099 469 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 SCAF8Q9UPN6 1271 aaKnown RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 MED23Q9ULK4 1368 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 SRGNP10124 158 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 PUM3Q15397 648 aaKnown RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 SLC27A3Q5K4L6 730 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 ZNF622Q969S3 477 aaKnown RBP eCLIP3.45□□□□□ -1.862e-8■□□□□ 10.7
LTN1-201ENST00000361371 DAXXQ9UER7 740 aaPredicted RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 SHANK3Q9BYB0 1731 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 IRS2Q9Y4H2 1338 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 STK3Q13188 491 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 GRAPQ13588 217 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 GRAPLQ8TC17 118 aaPredicted RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 SDR42E1Q8WUS8 393 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 TAOK2Q9UL54 1235 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 NRAPQ86VF7 1730 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 REC8O95072 547 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 MBD4O95243 580 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 FGAP02671 866 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 DDIT3P35638 169 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 CRY2Q49AN0 593 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 TCRBV5S4A2TA0A5A2 114 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 CYP2D6P10635 497 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 FBXO33Q7Z6M2 555 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 TBC1D10CQ8IV04 446 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 NLGN1Q8N2Q7 840 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 CERS5Q8N5B7 392 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 TTC14Q96N46 770 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 GJB4Q9NTQ9 266 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 TPCN1Q9ULQ1 816 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 F8W031 263 aaPredicted RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 C6orf229H3BNL8 230 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 GPAA1O43292 621 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 UFL1O94874 794 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 ARID4AP29374 1257 aaPredicted RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 ANTXR2P58335 489 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 NFKBIBQ15653 356 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 MCMDC2Q4G0Z9 681 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 TBC1D16Q8TBP0 767 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 BRF1Q92994 677 aa3.45□□□□□ -1.86
LTN1-201ENST00000361371 STRBPQ96SI9 672 aaKnown RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 CDC5LQ99459 802 aaKnown RBP3.45□□□□□ -1.86
LTN1-201ENST00000361371 CASTP20810 708 aaKnown RBP3.44□□□□□ -1.86
LTN1-201ENST00000361371 ADD2P35612 726 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 KCNJ4P48050 445 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 UBE4AQ14139 1066 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 KLHL34Q8N239 644 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 MAGEB6Q8N7X4 407 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 RAI14Q9P0K7 980 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 AKAP2Q9Y2D5 859 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 PLCH1Q4KWH8 1693 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 ZNF804BA4D1E1 1349 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 PARP4Q9UKK3 1724 aaKnown RBP3.44□□□□□ -1.86
LTN1-201ENST00000361371 ADRA2BP18089 450 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 RXRAP19793 462 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 HIBADHP31937 336 aaKnown RBP3.44□□□□□ -1.86
LTN1-201ENST00000361371 CTDSPL2Q05D32 466 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 TPRNQ4KMQ1 711 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 OTUD7BQ6GQQ9 843 aa3.44□□□□□ -1.86
LTN1-201ENST00000361371 DBNDD1Q9H9R9 158 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms