RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TEX11Q8IYF3 940 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 PTPDC1A2A3K4 754 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 KRT13P13646 458 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 MYCP01106 439 aaPredicted RBP23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 SDSP20132 328 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 ARHGAP27Q6ZUM4 889 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 UBXN4Q92575 508 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 TNNQ9UQP3 1299 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 USH1GQ495M9 461 aa23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 PLCH2O75038 1416 aa23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 ABCC1P33527 1531 aa23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 SPOUT1Q5T280 376 aaKnown RBP23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 RNMTO43148 476 aaKnown RBP23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 SYKP43405 635 aa23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 SPECC1Q5M775 1068 aa23.15■■□□□ 1.3
CDC42BPB-201ENST00000361246 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.3
CDC42BPB-201ENST00000361246 GOLGA6L7A0A1B0GV03 622 aa23.14■■□□□ 1.3
CDC42BPB-201ENST00000361246 RFX1P22670 979 aa23.14■■□□□ 1.3
CDC42BPB-201ENST00000361246 RBM25P49756 843 aaKnown RBP23.14■■□□□ 1.3
CDC42BPB-201ENST00000361246 GRIPAP1Q4V328 841 aa23.14■■□□□ 1.3
CDC42BPB-201ENST00000361246 HOXC9P31274 260 aa23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 IL15P40933 162 aaPredicted RBP23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 SMC1AQ14683 1233 aaKnown RBP23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 DPP8Q6V1X1 898 aaPredicted RBP23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 KLHDC4Q8TBB5 520 aa23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 AATFQ9NY61 560 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 NBPF7P0C2Y1 421 aaPredicted RBP23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 CCDC129Q6ZRS4 1044 aa23.14■■□□□ 1.29
CDC42BPB-201ENST00000361246 CPXCR1Q8N123 301 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 TSPYL6Q8N831 410 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 EYA1Q99502 592 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 ITGA6P23229 1130 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 PAIP2Q9BPZ3 127 aaKnown RBP23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 A1BGP04217 495 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 PAFAH1B1P43034 410 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 CNPY2Q9Y2B0 182 aa23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 C16orf45Q96MC5 204 aaPredicted RBP23.13■■□□□ 1.29
CDC42BPB-201ENST00000361246 CNNM2Q9H8M5 875 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 ARMT1Q9H993 441 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 GPHNQ9NQX3 736 aaPredicted RBP23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 N4BP3O15049 544 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 CCDC102BQ68D86 513 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 TMCO3Q6UWJ1 677 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 A2MP01023 1474 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 MAPK8IP2Q13387 824 aaPredicted RBP23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 ZSCAN12O43309 604 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 FAM114A1Q8IWE2 563 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
CDC42BPB-201ENST00000361246 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 MBD4O95243 580 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 TNPO1Q92973 898 aaKnown RBP23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 INCENPQ9NQS7 918 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 GGA1Q9UJY5 639 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 ANKRD2Q9GZV1 360 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 CCDC50Q8IVM0 306 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 TIMM10P62072 90 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 STX1AQ16623 288 aa23.11■■□□□ 1.29
CDC42BPB-201ENST00000361246 ALS2CR12Q96Q35 445 aa23.1■■□□□ 1.29
CDC42BPB-201ENST00000361246 NDUFB9Q9Y6M9 179 aa23.1■■□□□ 1.29
CDC42BPB-201ENST00000361246 POLR3GO15318 223 aaPredicted RBP23.1■■□□□ 1.29
CDC42BPB-201ENST00000361246 KRT2P35908 639 aa23.1■■□□□ 1.29
CDC42BPB-201ENST00000361246 DTNBO60941 627 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 STX17P56962 302 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 CIZ1Q9ULV3 898 aaPredicted RBP23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 PARP1P09874 1014 aaKnown RBP23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 ACTN2P35609 894 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 MAATS1Q7Z4T9 603 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 TSNARE1Q96NA8 513 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 IMPG2Q9BZV3 1241 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 DCAF17Q5H9S7 520 aaPredicted RBP23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 GSTA5Q7RTV2 222 aa23.09■■□□□ 1.29
CDC42BPB-201ENST00000361246 MRPL50Q8N5N7 158 aaKnown RBP23.08■■□□□ 1.29
CDC42BPB-201ENST00000361246 FERMT1Q9BQL6 677 aa23.08■■□□□ 1.29
CDC42BPB-201ENST00000361246 POLKQ9UBT6 870 aa23.08■■□□□ 1.29
CDC42BPB-201ENST00000361246 ZFP91Q96JP5 570 aaPredicted RBP23.08■■□□□ 1.29
CDC42BPB-201ENST00000361246 DCAF5Q96JK2 942 aa23.08■■□□□ 1.29
CDC42BPB-201ENST00000361246 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
CDC42BPB-201ENST00000361246 SPAG5Q96R06 1193 aa23.08■■□□□ 1.28
CDC42BPB-201ENST00000361246 CCDC169A6NNP5 214 aa23.08■■□□□ 1.28
CDC42BPB-201ENST00000361246 KRT5P13647 590 aa23.08■■□□□ 1.28
CDC42BPB-201ENST00000361246 CNGA1P29973 690 aa23.08■■□□□ 1.28
CDC42BPB-201ENST00000361246 STAMBPO95630 424 aa23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 HIBADHP31937 336 aaKnown RBP23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 HMG20BQ9P0W2 317 aa23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 IVNS1ABPQ9Y6Y0 642 aa23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 TSPOAP1O95153 1857 aa23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 RNF113AO15541 343 aaKnown RBP23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 PPP1R14CQ8TAE6 165 aa23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 PAGR1Q9BTK6 254 aa23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 ZFYP08048 801 aaPredicted RBP23.07■■□□□ 1.28
CDC42BPB-201ENST00000361246 NOP56O00567 594 aaKnown RBP23.06■■□□□ 1.28
CDC42BPB-201ENST00000361246 LETM2Q2VYF4 491 aa23.06■■□□□ 1.28
CDC42BPB-201ENST00000361246 GCOM1H8Y6P7 765 aaPredicted RBP23.06■■□□□ 1.28
CDC42BPB-201ENST00000361246 MYZAPP0CAP1 466 aa23.06■■□□□ 1.28
CDC42BPB-201ENST00000361246 GPIHBP1Q8IV16 184 aa23.06■■□□□ 1.28
CDC42BPB-201ENST00000361246 B4DLN1 442 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms