RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
CCDC197-201ENST00000359253 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
CCDC197-201ENST00000359253 HSCBQ8IWL3 235 aa16.28■□□□□ 0.2
CCDC197-201ENST00000359253 KIF2CQ99661 725 aa16.28■□□□□ 0.2
CCDC197-201ENST00000359253 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
CCDC197-201ENST00000359253 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
CCDC197-201ENST00000359253 KIF13BQ9NQT8 1826 aa16.28■□□□□ 0.2
CCDC197-201ENST00000359253 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
CCDC197-201ENST00000359253 DPEP1P16444 411 aa16.27■□□□□ 0.2
CCDC197-201ENST00000359253 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
CCDC197-201ENST00000359253 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
CCDC197-201ENST00000359253 ZBTB22O15209 634 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 SRGNP10124 158 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
CCDC197-201ENST00000359253 HSPA4P34932 840 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
CCDC197-201ENST00000359253 UBE4AQ14139 1066 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 ZSCAN25Q6NSZ9 544 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 MASTLQ96GX5 879 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
CCDC197-201ENST00000359253 TBC1D2Q9BYX2 928 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 ANKRD2Q9GZV1 360 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 LSG1Q9H089 658 aaKnown RBP16.26■□□□□ 0.19
CCDC197-201ENST00000359253 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
CCDC197-201ENST00000359253 ST18O60284 1047 aa16.25■□□□□ 0.19
CCDC197-201ENST00000359253 ALDH1B1P30837 517 aa16.25■□□□□ 0.19
CCDC197-201ENST00000359253 MCM2P49736 904 aa16.25■□□□□ 0.19
CCDC197-201ENST00000359253 GPR162Q16538 588 aa16.25■□□□□ 0.19
CCDC197-201ENST00000359253 CRY2Q49AN0 593 aa16.25■□□□□ 0.19
CCDC197-201ENST00000359253 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
CCDC197-201ENST00000359253 NPR1P16066 1061 aa16.24■□□□□ 0.19
CCDC197-201ENST00000359253 ADORA1P30542 326 aa16.24■□□□□ 0.19
CCDC197-201ENST00000359253 CHRNDQ07001 517 aa16.24■□□□□ 0.19
CCDC197-201ENST00000359253 NMIQ13287 307 aaPredicted RBP16.24■□□□□ 0.19
CCDC197-201ENST00000359253 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
CCDC197-201ENST00000359253 TTLL6Q8N841 843 aa16.24■□□□□ 0.19
CCDC197-201ENST00000359253 ARAP2Q8WZ64 1704 aa16.24■□□□□ 0.19
CCDC197-201ENST00000359253 GOLIM4O00461 696 aa16.23■□□□□ 0.19
CCDC197-201ENST00000359253 CHRNA5P30532 468 aa16.23■□□□□ 0.19
CCDC197-201ENST00000359253 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
CCDC197-201ENST00000359253 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
CCDC197-201ENST00000359253 CCDC102BQ68D86 513 aa16.23■□□□□ 0.19
CCDC197-201ENST00000359253 MAP4K1Q92918 833 aa16.23■□□□□ 0.19
CCDC197-201ENST00000359253 KCNB2Q92953 911 aa16.23■□□□□ 0.19
CCDC197-201ENST00000359253 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC197-201ENST00000359253 MED23Q9ULK4 1368 aa16.23■□□□□ 0.19
CCDC197-201ENST00000359253 CCDC171Q6TFL3 1326 aa16.22■□□□□ 0.19
CCDC197-201ENST00000359253 RNF113AO15541 343 aaKnown RBP16.22■□□□□ 0.19
CCDC197-201ENST00000359253 IGSF3O75054 1194 aa16.22■□□□□ 0.19
CCDC197-201ENST00000359253 RNF20Q5VTR2 975 aa16.22■□□□□ 0.19
CCDC197-201ENST00000359253 GNL3LQ9NVN8 582 aaKnown RBP16.22■□□□□ 0.19
CCDC197-201ENST00000359253 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
CCDC197-201ENST00000359253 ZKSCAN1P17029 563 aaPredicted RBP16.21■□□□□ 0.19
CCDC197-201ENST00000359253 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC197-201ENST00000359253 GRAPQ13588 217 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 TMC4Q7Z404 712 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 GRAPLQ8TC17 118 aaPredicted RBP16.21■□□□□ 0.19
CCDC197-201ENST00000359253 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC197-201ENST00000359253 FAM227BQ96M60 508 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 CRAMP1Q96RY5 1269 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
CCDC197-201ENST00000359253 K7ELQ4 463 aaPredicted RBP16.2■□□□□ 0.18
CCDC197-201ENST00000359253 GRIPAP1Q4V328 841 aa16.2■□□□□ 0.18
CCDC197-201ENST00000359253 CAVIN4Q5BKX8 364 aa16.2■□□□□ 0.18
CCDC197-201ENST00000359253 TMED8Q6PL24 325 aaPredicted RBP16.2■□□□□ 0.18
CCDC197-201ENST00000359253 CELF1Q92879 486 aaKnown RBP16.2■□□□□ 0.18
CCDC197-201ENST00000359253 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
CCDC197-201ENST00000359253 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
CCDC197-201ENST00000359253 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 SEMA3EO15041 775 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 TAF5LO75529 589 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 BBOX1O75936 387 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 MCAMP43121 646 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 SOGA3Q5TF21 947 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 HELBQ8NG08 1087 aaPredicted RBP16.19■□□□□ 0.18
CCDC197-201ENST00000359253 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
CCDC197-201ENST00000359253 EDC3Q96F86 508 aaKnown RBP16.19■□□□□ 0.18
CCDC197-201ENST00000359253 IL25Q9H293 177 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 LEMD3Q9Y2U8 911 aa16.19■□□□□ 0.18
CCDC197-201ENST00000359253 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
CCDC197-201ENST00000359253 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC197-201ENST00000359253 PSMA5P28066 241 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 ZAP70P43403 619 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 KCNJ4P48050 445 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 NECTIN1Q15223 517 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 UBE3CQ15386 1083 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 TSGA10IPQ3SY00 556 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 CC2D2BQ6DHV5 1058 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 DSCC1Q9BVC3 393 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 ZNF804BA4D1E1 1349 aa16.18■□□□□ 0.18
CCDC197-201ENST00000359253 PDS5AQ29RF7 1337 aaKnown RBP16.18■□□□□ 0.18
CCDC197-201ENST00000359253 PHKA1P46020 1223 aa16.17■□□□□ 0.18
CCDC197-201ENST00000359253 KRT32Q14532 448 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms