RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SLC27A2O14975 620 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 AK2P54819 239 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 HIP1O00291 1037 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 LARGE1O95461 756 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 AK7Q96M32 723 aa15.14■□□□□ 0.01
GGPS1-202ENST00000358966 M0R2C6 588 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 CLEC4GQ6UXB4 293 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
GGPS1-202ENST00000358966 CELF1Q92879 486 aaKnown RBP15.13■□□□□ 0.01
GGPS1-202ENST00000358966 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 LY75O60449 1722 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
GGPS1-202ENST00000358966 OSBP2Q969R2 916 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 C4BP0C0L5 1744 aa15.13■□□□□ 0.01
GGPS1-202ENST00000358966 MAST3O60307 1309 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 AKAP11Q9UKA4 1901 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 NPHP1O15259 732 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 RFC4P35249 363 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 CASZ1Q86V15 1759 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 ESPNB1AK53 854 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 CHRNDQ07001 517 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 WASHC4Q2M389 1173 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 TTC14Q96N46 770 aa15.12■□□□□ 0.01
GGPS1-202ENST00000358966 CYP2E1P05181 493 aaPredicted RBP15.11■□□□□ 0.01
GGPS1-202ENST00000358966 C4AP0C0L4 1744 aa15.11■□□□□ 0.01
GGPS1-202ENST00000358966 BCAMP50895 628 aa15.11■□□□□ 0.01
GGPS1-202ENST00000358966 RC3H1Q5TC82 1133 aaKnown RBP15.11■□□□□ 0.01
GGPS1-202ENST00000358966 IGHMBP2P38935 993 aaKnown RBP15.11■□□□□ 0.01
GGPS1-202ENST00000358966 PUM3Q15397 648 aaKnown RBP15.11■□□□□ 0.01
GGPS1-202ENST00000358966 TTLL5Q6EMB2 1281 aa15.11■□□□□ 0.01
GGPS1-202ENST00000358966 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
GGPS1-202ENST00000358966 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
GGPS1-202ENST00000358966 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
GGPS1-202ENST00000358966 ZNF831Q5JPB2 1677 aa15.11■□□□□ 0.01
GGPS1-202ENST00000358966 LRP5O75197 1615 aa15.11■□□□□ 0.01
GGPS1-202ENST00000358966 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
GGPS1-202ENST00000358966 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
GGPS1-202ENST00000358966 LRRC2Q9BYS8 371 aa15.1■□□□□ 0.01
GGPS1-202ENST00000358966 CYP21A2P08686 494 aa15.1■□□□□ 0.01
GGPS1-202ENST00000358966 FGFR2P21802 821 aa15.1■□□□□ 0.01
GGPS1-202ENST00000358966 RAB3GAP1Q15042 981 aa15.1■□□□□ 0.01
GGPS1-202ENST00000358966 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
GGPS1-202ENST00000358966 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
GGPS1-202ENST00000358966 PROM2Q8N271 834 aa15.1■□□□□ 0.01
GGPS1-202ENST00000358966 RNF113AO15541 343 aaKnown RBP15.09■□□□□ 0.01
GGPS1-202ENST00000358966 ZKSCAN1P17029 563 aaPredicted RBP15.09■□□□□ 0.01
GGPS1-202ENST00000358966 KLRK1P26718 216 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 RASGRF1Q13972 1273 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 ZMYM1Q5SVZ6 1142 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 MROH5Q6ZUA9 1318 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 GOLGA6L3A6NEY3 463 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 MCM4P33991 863 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 NFIXQ14938 502 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 LPIN2Q92539 896 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 ZNF830Q96NB3 372 aaPredicted RBP15.09■□□□□ 0.01
GGPS1-202ENST00000358966 TMEM51Q9NW97 253 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
GGPS1-202ENST00000358966 VGLL3A8MV65 326 aa15.08■□□□□ 0.01
GGPS1-202ENST00000358966 PDRG1Q9NUG6 133 aa15.08■□□□□ 0.01
GGPS1-202ENST00000358966 FOXP2O15409 715 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 NCLP19338 710 aaKnown RBP15.08■□□□□ 0
GGPS1-202ENST00000358966 GYG1P46976 350 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 HAND2P61296 217 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 STOX1Q6ZVD7 989 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 NECAB1Q8N987 351 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 IL17RAQ96F46 866 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 HMG20BQ9P0W2 317 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 LAMB2P55268 1798 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 HSPD1P10809 573 aaKnown RBP15.08■□□□□ 0
GGPS1-202ENST00000358966 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 GZF1Q9H116 711 aaPredicted RBP15.08■□□□□ 0
GGPS1-202ENST00000358966 ZDHHC9Q9Y397 364 aa15.08■□□□□ 0
GGPS1-202ENST00000358966 EPB41L2O43491 1005 aaKnown RBP15.07■□□□□ 0
GGPS1-202ENST00000358966 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
GGPS1-202ENST00000358966 DHX37Q8IY37 1157 aaKnown RBP15.07■□□□□ 0
GGPS1-202ENST00000358966 ZSWIM6Q9HCJ5 1215 aa15.07■□□□□ 0
GGPS1-202ENST00000358966 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
GGPS1-202ENST00000358966 SLC5A1P13866 664 aa15.07■□□□□ 0
GGPS1-202ENST00000358966 CHST3Q7LGC8 479 aa15.07■□□□□ 0
GGPS1-202ENST00000358966 JAG2Q9Y219 1238 aa15.07■□□□□ 0
GGPS1-202ENST00000358966 TNRC6CQ9HCJ0 1690 aaKnown RBP15.07■□□□□ 0
GGPS1-202ENST00000358966 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
GGPS1-202ENST00000358966 CCDC83Q8IWF9 413 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 KCNB2Q92953 911 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 CDC5LQ99459 802 aaKnown RBP15.06■□□□□ 0
GGPS1-202ENST00000358966 ARID3AQ99856 593 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 ST3GAL1Q11201 340 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 STK3Q13188 491 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 TXNRD1Q16881 649 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 TPCN1Q9ULQ1 816 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 MINPP1Q9UNW1 487 aa15.06■□□□□ 0
GGPS1-202ENST00000358966 SF3B3Q15393 1217 aaKnown RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms