RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
CCR9-202ENST00000357632 NFIXQ14938 502 aa12.47□□□□□ -0.41
CCR9-202ENST00000357632 SEMA3EO15041 775 aa12.46□□□□□ -0.41
CCR9-202ENST00000357632 PHF14O94880 888 aa12.46□□□□□ -0.41
CCR9-202ENST00000357632 GYS1P13807 737 aa12.46□□□□□ -0.41
CCR9-202ENST00000357632 TM4SF1P30408 202 aa12.46□□□□□ -0.41
CCR9-202ENST00000357632 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCR9-202ENST00000357632 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
CCR9-202ENST00000357632 PDS5AQ29RF7 1337 aaKnown RBP12.46□□□□□ -0.41
CCR9-202ENST00000357632 APBA3O96018 575 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 PTH1RQ03431 593 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 UBE3CQ15386 1083 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 NLGN1Q8N2Q7 840 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 APPBP2Q92624 585 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 INTS4Q96HW7 963 aaKnown RBP12.46□□□□□ -0.42
CCR9-202ENST00000357632 PALD1Q9ULE6 856 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 EP400Q96L91 3159 aa12.46□□□□□ -0.42
CCR9-202ENST00000357632 DDIT3P35638 169 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 TMC4Q7Z404 712 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 NRXN2Q9P2S2 1712 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 MCAMP43121 646 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 ZAP70P43403 619 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 CAVIN4Q5BKX8 364 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 VPS53Q5VIR6 699 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 EDC3Q96F86 508 aaKnown RBP12.45□□□□□ -0.42
CCR9-202ENST00000357632 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 CTNNA3Q9UI47 895 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 CYP46A1Q9Y6A2 500 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
CCR9-202ENST00000357632 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
CCR9-202ENST00000357632 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
CCR9-202ENST00000357632 SLC27A2O14975 620 aa12.44□□□□□ -0.42
CCR9-202ENST00000357632 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 GRAPQ13588 217 aa12.44□□□□□ -0.42
CCR9-202ENST00000357632 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 PROM2Q8N271 834 aa12.44□□□□□ -0.42
CCR9-202ENST00000357632 SPATA5Q8NB90 893 aa12.44□□□□□ -0.42
CCR9-202ENST00000357632 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 SLKQ9H2G2 1235 aaPredicted RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 RPAP1Q9BWH6 1393 aaPredicted RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 TNRC6CQ9HCJ0 1690 aaKnown RBP12.44□□□□□ -0.42
CCR9-202ENST00000357632 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
CCR9-202ENST00000357632 SERPINB2P05120 415 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 NUCB2P80303 420 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 MAP3K12Q12852 859 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 CUL4AQ13619 759 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 PDIA4P13667 645 aaKnown RBP12.43□□□□□ -0.42
CCR9-202ENST00000357632 ADD2P35612 726 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 PHKA1P46020 1223 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 PRR5LQ6MZQ0 368 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 RUFY3Q7L099 469 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
CCR9-202ENST00000357632 TTC14Q96N46 770 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 LEMD3Q9Y2U8 911 aa12.43□□□□□ -0.42
CCR9-202ENST00000357632 PTMSP20962 102 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 RBM17Q96I25 401 aaKnown RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 MYH13Q9UKX3 1938 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 MAST3O60307 1309 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 CYP2E1P05181 493 aaPredicted RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 HELBQ8NG08 1087 aaPredicted RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
CCR9-202ENST00000357632 DUOX1Q9NRD9 1551 aa12.42□□□□□ -0.42
CCR9-202ENST00000357632 SCARF1Q14162 830 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
CCR9-202ENST00000357632 CHMP4CQ96CF2 233 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 JAKMIP1Q96N16 626 aaKnown RBP12.41□□□□□ -0.42
CCR9-202ENST00000357632 CRAMP1Q96RY5 1269 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 LIMCH1Q9UPQ0 1083 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 ZMYM6O95789 1325 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 BBOX1O75936 387 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
CCR9-202ENST00000357632 HOXA10P31260 410 aaPredicted RBP12.41□□□□□ -0.42
CCR9-202ENST00000357632 WASHC4Q2M389 1173 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 TAF1P21675 1872 aa12.41□□□□□ -0.42
CCR9-202ENST00000357632 POLRMTO00411 1230 aaKnown RBP12.4□□□□□ -0.42
CCR9-202ENST00000357632 HSPD1P10809 573 aaKnown RBP12.4□□□□□ -0.42
CCR9-202ENST00000357632 PDRG1Q9NUG6 133 aa12.4□□□□□ -0.42
CCR9-202ENST00000357632 GNAT2P19087 354 aa12.4□□□□□ -0.42
CCR9-202ENST00000357632 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
CCR9-202ENST00000357632 NFKBIBQ15653 356 aa12.4□□□□□ -0.42
CCR9-202ENST00000357632 SMIM5Q71RC9 77 aa12.4□□□□□ -0.42
CCR9-202ENST00000357632 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
CCR9-202ENST00000357632 LRRC37AA6NMS7 1700 aa12.4□□□□□ -0.43
CCR9-202ENST00000357632 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
CCR9-202ENST00000357632 VPS37DQ86XT2 251 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms