RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 PDE8AO60658 829 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 FGFR2P21802 821 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 BLOC1S2Q6QNY1 142 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 HELLSQ9NRZ9 838 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
CCDC25-201ENST00000356537 RNF113AO15541 343 aaKnown RBP11.31□□□□□ -0.6
CCDC25-201ENST00000356537 NTSR2O95665 410 aa11.31□□□□□ -0.6
CCDC25-201ENST00000356537 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
CCDC25-201ENST00000356537 CNPY2Q9Y2B0 182 aa11.31□□□□□ -0.6
CCDC25-201ENST00000356537 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
CCDC25-201ENST00000356537 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
CCDC25-201ENST00000356537 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
CCDC25-201ENST00000356537 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
CCDC25-201ENST00000356537 A0A0G2JS52 829 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 ZNF445P59923 1031 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 PHKA1P46020 1223 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 WDR33Q9C0J8 1336 aaKnown RBP11.3□□□□□ -0.6
CCDC25-201ENST00000356537 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 ECM29Q5VYK3 1845 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 GOLGA6L22H0YM25 854 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 PDE8BO95263 885 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 F13A1P00488 732 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 PTMSP20962 102 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 EXOSC10Q01780 885 aaKnown RBP11.3□□□□□ -0.6
CCDC25-201ENST00000356537 METTL24Q5JXM2 366 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 Q6ZUG5 572 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
CCDC25-201ENST00000356537 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
CCDC25-201ENST00000356537 DENND2AQ9ULE3 1009 aa11.3□□□□□ -0.6
CCDC25-201ENST00000356537 ABCC12Q96J65 1359 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 MRE11P49959 708 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 STK3Q13188 491 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
CCDC25-201ENST00000356537 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
CCDC25-201ENST00000356537 U3KPZ7 1027 aaPredicted RBP11.29□□□□□ -0.6
CCDC25-201ENST00000356537 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 JAK2O60674 1132 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 PSMA5P28066 241 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 RNF20Q5VTR2 975 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 TMEM87AQ8NBN3 555 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 AKAP2Q9Y2D5 859 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 E7EWF7 191 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 ZSCAN31Q96LW9 406 aaPredicted RBP11.29□□□□□ -0.6
CCDC25-201ENST00000356537 AGXT2Q9BYV1 514 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
CCDC25-201ENST00000356537 ATRNO75882 1429 aa11.29□□□□□ -0.6
CCDC25-201ENST00000356537 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 TCRBV5S4A2TA0A5A2 114 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 FAM173BQ6P4H8 233 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
CCDC25-201ENST00000356537 TOM1O60784 492 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 ARID4AP29374 1257 aaPredicted RBP11.28□□□□□ -0.6
CCDC25-201ENST00000356537 SCRN1Q12765 414 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 VPS72Q15906 364 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
CCDC25-201ENST00000356537 GTF3C6Q969F1 213 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
CCDC25-201ENST00000356537 RBSNQ9H1K0 784 aa11.28□□□□□ -0.6
CCDC25-201ENST00000356537 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.6
CCDC25-201ENST00000356537 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.6
CCDC25-201ENST00000356537 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.6
CCDC25-201ENST00000356537 COL1A1P02452 1464 aaPredicted RBP11.27□□□□□ -0.61
CCDC25-201ENST00000356537 TICAM2Q86XR7 235 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 CACNA1SQ13698 1873 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 FGAP02671 866 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 SLC51AQ86UW1 340 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 BRF1Q92994 677 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC25-201ENST00000356537 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
CCDC25-201ENST00000356537 UTP14AQ9BVJ6 771 aaKnown RBP11.26□□□□□ -0.61
CCDC25-201ENST00000356537 SYCE3A1L190 88 aa11.26□□□□□ -0.61
CCDC25-201ENST00000356537 ADD2P35612 726 aa11.26□□□□□ -0.61
CCDC25-201ENST00000356537 HAND2P61296 217 aa11.26□□□□□ -0.61
CCDC25-201ENST00000356537 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
CCDC25-201ENST00000356537 KRT32Q14532 448 aa11.26□□□□□ -0.61
CCDC25-201ENST00000356537 SALL1Q9NSC2 1324 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 RTL9Q8NET4 1388 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 MYH13Q9UKX3 1938 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 UBAP1LF5GYI3 381 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 ANTXR2P58335 489 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 RASGRF1Q13972 1273 aa11.25□□□□□ -0.61
CCDC25-201ENST00000356537 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
CCDC25-201ENST00000356537 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
CCDC25-201ENST00000356537 GPAA1O43292 621 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms