RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 PDCL2Q8N4E4 241 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 MYL10Q9BUA6 226 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 E7EWF7 191 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 IDH1O75874 414 aaKnown RBP16.23■□□□□ 0.19
EBF3-201ENST00000355311 CTDNEP1O95476 244 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 CCDC192P0DO97 292 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 CASP7P55210 303 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 GTF3C6Q969F1 213 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
EBF3-201ENST00000355311 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 ME1P48163 572 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 CCDC186Q7Z3E2 898 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 PIBF1Q8WXW3 757 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 USP28Q96RU2 1077 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 CBX8Q9HC52 389 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 MAST3O60307 1309 aa16.22■□□□□ 0.19
EBF3-201ENST00000355311 RIOK3O14730 519 aaKnown RBP16.21■□□□□ 0.19
EBF3-201ENST00000355311 BRINP3Q76B58 766 aa16.21■□□□□ 0.19
EBF3-201ENST00000355311 A0A1B0GVL5 298 aa16.21■□□□□ 0.19
EBF3-201ENST00000355311 TUBGCP6Q96RT7 1819 aa16.21■□□□□ 0.19
EBF3-201ENST00000355311 EYA2O00167 538 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 PDE4CQ08493 712 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 ACSBG1Q96GR2 724 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
EBF3-201ENST00000355311 H7C1W4 665 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 FUCA2Q9BTY2 467 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 LDHAL6AQ6ZMR3 332 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 CMTR1Q8N1G2 835 aaKnown RBP16.2■□□□□ 0.18
EBF3-201ENST00000355311 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 GREM2Q9H772 168 aa16.2■□□□□ 0.18
EBF3-201ENST00000355311 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 METTL24Q5JXM2 366 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 ZNF771Q7L3S4 317 aaPredicted RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 FILIP1Q7Z7B0 1213 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 CNNM1Q9NRU3 951 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 FGAP02671 866 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 ATP2B1P20020 1258 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 PDCP20941 246 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 MARCKSP29966 332 aaPredicted RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 ZNF165P49910 485 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 DHX32Q7L7V1 743 aaKnown RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 NSUN7Q8NE18 718 aaKnown RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 KCNB2Q92953 911 aa16.19■□□□□ 0.18
EBF3-201ENST00000355311 C16orf45Q96MC5 204 aaPredicted RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
EBF3-201ENST00000355311 C11orf57Q6ZUT1 292 aaPredicted RBP16.18■□□□□ 0.18
EBF3-201ENST00000355311 PIGBQ92521 554 aa16.18■□□□□ 0.18
EBF3-201ENST00000355311 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
EBF3-201ENST00000355311 KDM3BQ7LBC6 1761 aa16.18■□□□□ 0.18
EBF3-201ENST00000355311 SLC4A8Q2Y0W8 1093 aa16.18■□□□□ 0.18
EBF3-201ENST00000355311 RRP12Q5JTH9 1297 aaKnown RBP16.18■□□□□ 0.18
EBF3-201ENST00000355311 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
EBF3-201ENST00000355311 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
EBF3-201ENST00000355311 IL17RAQ96F46 866 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
EBF3-201ENST00000355311 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 SPATA31A3Q5VYP0 1347 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 IL2RBP14784 551 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 RESTQ13127 1097 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 PHKBQ93100 1093 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 KLF18A0A0U1RQI7 1052 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 RNF113AO15541 343 aaKnown RBP16.17■□□□□ 0.18
EBF3-201ENST00000355311 PDIA3P30101 505 aaKnown RBP16.17■□□□□ 0.18
EBF3-201ENST00000355311 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
EBF3-201ENST00000355311 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
EBF3-201ENST00000355311 NPHP1O15259 732 aa16.16■□□□□ 0.18
EBF3-201ENST00000355311 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
EBF3-201ENST00000355311 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
EBF3-201ENST00000355311 TRMT1Q9NXH9 659 aaKnown RBP16.16■□□□□ 0.18
EBF3-201ENST00000355311 IL15P40933 162 aaPredicted RBP16.16■□□□□ 0.18
EBF3-201ENST00000355311 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
EBF3-201ENST00000355311 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
EBF3-201ENST00000355311 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
EBF3-201ENST00000355311 TMEM51Q9NW97 253 aa16.16■□□□□ 0.18
EBF3-201ENST00000355311 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
EBF3-201ENST00000355311 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
EBF3-201ENST00000355311 ITGA6P23229 1130 aa16.15■□□□□ 0.18
EBF3-201ENST00000355311 HMGN5P82970 282 aaKnown RBP16.15■□□□□ 0.18
EBF3-201ENST00000355311 GTPBP4Q9BZE4 634 aaKnown RBP16.15■□□□□ 0.18
EBF3-201ENST00000355311 SCAND2PQ9GZW5 306 aaPredicted RBP16.15■□□□□ 0.18
EBF3-201ENST00000355311 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
EBF3-201ENST00000355311 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
EBF3-201ENST00000355311 MICU3Q86XE3 530 aa16.15■□□□□ 0.18
EBF3-201ENST00000355311 FSIP1Q8NA03 581 aa16.15■□□□□ 0.18
EBF3-201ENST00000355311 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
EBF3-201ENST00000355311 CCDC144BQ3MJ40 725 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms