RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 KCNA4P22459 653 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 TTC39AQ5SRH9 613 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 HMGB1P09429 215 aaKnown RBP23■■□□□ 1.27
COL13A1-201ENST00000354547 CCDC191Q8NCU4 936 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 GOLGA6L6A8MZA4 724 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 CCDC186Q7Z3E2 898 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 CCAR1Q8IX12 1150 aaKnown RBP23■■□□□ 1.27
COL13A1-201ENST00000354547 DSCC1Q9BVC3 393 aa23■■□□□ 1.27
COL13A1-201ENST00000354547 ZSCAN16Q9H4T2 348 aaPredicted RBP23■■□□□ 1.27
COL13A1-201ENST00000354547 LRMPQ12912 555 aa22.99■■□□□ 1.27
COL13A1-201ENST00000354547 USP28Q96RU2 1077 aa22.99■■□□□ 1.27
COL13A1-201ENST00000354547 DYNC1I1O14576 645 aa22.99■■□□□ 1.27
COL13A1-201ENST00000354547 SMARCC2Q8TAQ2 1214 aa22.99■■□□□ 1.27
COL13A1-201ENST00000354547 EXOSC10Q01780 885 aaKnown RBP22.98■■□□□ 1.27
COL13A1-201ENST00000354547 SCARF1Q14162 830 aa22.98■■□□□ 1.27
COL13A1-201ENST00000354547 PDIA3P30101 505 aaKnown RBP22.98■■□□□ 1.27
COL13A1-201ENST00000354547 ADAMTSL3P82987 1691 aa22.98■■□□□ 1.27
COL13A1-201ENST00000354547 PALLDQ8WX93 1383 aa22.98■■□□□ 1.27
COL13A1-201ENST00000354547 ME1P48163 572 aa22.98■■□□□ 1.27
COL13A1-201ENST00000354547 CCDC158Q5M9N0 1113 aa22.98■■□□□ 1.27
COL13A1-201ENST00000354547 XAGE2Q96GT9 111 aa22.98■■□□□ 1.27
COL13A1-201ENST00000354547 LMTK3Q96Q04 1460 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 GPTP24298 496 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 KIAA1524Q8TCG1 905 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 COL18A1P39060 1754 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 KAT6BQ8WYB5 2073 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 GOLPH3LQ9H4A5 285 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 RFX7Q2KHR2 1363 aa22.97■■□□□ 1.27
COL13A1-201ENST00000354547 ADD1P35611 737 aaKnown RBP22.96■■□□□ 1.27
COL13A1-201ENST00000354547 EVA1CP58658 441 aa22.96■■□□□ 1.27
COL13A1-201ENST00000354547 WDR17Q8IZU2 1322 aa22.96■■□□□ 1.27
COL13A1-201ENST00000354547 MYRIPQ8NFW9 859 aa22.96■■□□□ 1.27
COL13A1-201ENST00000354547 GJB4Q9NTQ9 266 aa22.96■■□□□ 1.27
COL13A1-201ENST00000354547 ZAP70P43403 619 aa22.95■■□□□ 1.27
COL13A1-201ENST00000354547 LLPHQ9BRT6 129 aaKnown RBP22.95■■□□□ 1.27
COL13A1-201ENST00000354547 ERVV-2B6SEH9 535 aa22.95■■□□□ 1.26
COL13A1-201ENST00000354547 POLR3DP05423 398 aaPredicted RBP22.95■■□□□ 1.26
COL13A1-201ENST00000354547 GPR108Q9NPR9 543 aa22.95■■□□□ 1.26
COL13A1-201ENST00000354547 IL2RBP14784 551 aa22.95■■□□□ 1.26
COL13A1-201ENST00000354547 HMGN5P82970 282 aaKnown RBP22.95■■□□□ 1.26
COL13A1-201ENST00000354547 C11orf57Q6ZUT1 292 aaPredicted RBP22.94■■□□□ 1.26
COL13A1-201ENST00000354547 CCDC73Q6ZRK6 1079 aa22.94■■□□□ 1.26
COL13A1-201ENST00000354547 BRINP3Q76B58 766 aa22.94■■□□□ 1.26
COL13A1-201ENST00000354547 PUS7LQ9H0K6 701 aaKnown RBP22.94■■□□□ 1.26
COL13A1-201ENST00000354547 SPTLC3Q9NUV7 552 aa22.94■■□□□ 1.26
COL13A1-201ENST00000354547 DNAJC10Q8IXB1 793 aa22.93■■□□□ 1.26
COL13A1-201ENST00000354547 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
COL13A1-201ENST00000354547 KIF3AQ9Y496 699 aa22.93■■□□□ 1.26
COL13A1-201ENST00000354547 FGAP02671 866 aa22.93■■□□□ 1.26
COL13A1-201ENST00000354547 ZNF75DP51815 510 aa22.93■■□□□ 1.26
COL13A1-201ENST00000354547 NAA16Q6N069 864 aaPredicted RBP22.93■■□□□ 1.26
COL13A1-201ENST00000354547 GOLGA6L19H0YKK7 550 aa22.92■■□□□ 1.26
COL13A1-201ENST00000354547 TCIRG1Q13488 830 aa22.92■■□□□ 1.26
COL13A1-201ENST00000354547 FSIP1Q8NA03 581 aa22.92■■□□□ 1.26
COL13A1-201ENST00000354547 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
COL13A1-201ENST00000354547 RBM43Q6ZSC3 357 aaKnown RBP22.92■■□□□ 1.26
COL13A1-201ENST00000354547 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
COL13A1-201ENST00000354547 CLIP2Q9UDT6 1046 aa22.92■■□□□ 1.26
COL13A1-201ENST00000354547 RCOR1Q9UKL0 485 aa22.92■■□□□ 1.26
COL13A1-201ENST00000354547 KLF18A0A0U1RQI7 1052 aa22.91■■□□□ 1.26
COL13A1-201ENST00000354547 KINO60870 393 aaKnown RBP22.91■■□□□ 1.26
COL13A1-201ENST00000354547 FDPSP14324 419 aaKnown RBP22.91■■□□□ 1.26
COL13A1-201ENST00000354547 IFIT5Q13325 482 aaKnown RBP22.91■■□□□ 1.26
COL13A1-201ENST00000354547 IMMTQ16891 758 aaKnown RBP22.91■■□□□ 1.26
COL13A1-201ENST00000354547 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
COL13A1-201ENST00000354547 PRC1O43663 620 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 ZNF396Q96N95 335 aaPredicted RBP22.9■■□□□ 1.26
COL13A1-201ENST00000354547 A0A1B0GVL5 298 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 GOLGA8BA8MQT2 603 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 CIAO1O76071 339 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 TPM3P06753 285 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 METTL24Q5JXM2 366 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 PRIMPOLQ96LW4 560 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 DENND2AQ9ULE3 1009 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 CARMIL3Q8ND23 1372 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 FOXP2O15409 715 aa22.9■■□□□ 1.26
COL13A1-201ENST00000354547 TDRD7Q8NHU6 1098 aaKnown RBP22.9■■□□□ 1.26
COL13A1-201ENST00000354547 LAMA4Q16363 1823 aa22.89■■□□□ 1.26
COL13A1-201ENST00000354547 BECN2A8MW95 431 aa22.89■■□□□ 1.26
COL13A1-201ENST00000354547 APPP05067 770 aa22.89■■□□□ 1.26
COL13A1-201ENST00000354547 SF3A1Q15459 793 aaKnown RBP22.89■■□□□ 1.26
COL13A1-201ENST00000354547 KIF6Q6ZMV9 814 aa22.89■■□□□ 1.26
COL13A1-201ENST00000354547 ZNF274Q96GC6 653 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-201ENST00000354547 C16orf45Q96MC5 204 aaPredicted RBP22.89■■□□□ 1.26
COL13A1-201ENST00000354547 ISCA1Q9BUE6 129 aa22.89■■□□□ 1.26
COL13A1-201ENST00000354547 AGXT2Q9BYV1 514 aa22.89■■□□□ 1.26
COL13A1-201ENST00000354547 CPDO75976 1380 aa22.89■■□□□ 1.25
COL13A1-201ENST00000354547 LDHAL6AQ6ZMR3 332 aa22.89■■□□□ 1.25
COL13A1-201ENST00000354547 AKAP2Q9Y2D5 859 aa22.89■■□□□ 1.25
COL13A1-201ENST00000354547 RXRAP19793 462 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 SNW1Q13573 536 aaKnown RBP22.88■■□□□ 1.25
COL13A1-201ENST00000354547 SDF4Q9BRK5 362 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 CPLX1O14810 134 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 ARID5BQ14865 1188 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 HLFQ16534 295 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 CCDC144BQ3MJ40 725 aa22.88■■□□□ 1.25
COL13A1-201ENST00000354547 RALYLQ86SE5 291 aaKnown RBP22.88■■□□□ 1.25
COL13A1-201ENST00000354547 PLA2G4DQ86XP0 818 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms