RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
PTPN2-203ENST00000353319 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
PTPN2-203ENST00000353319 AKAP11Q9UKA4 1901 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 ZAP70P43403 619 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 AK2P54819 239 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 SCARF1Q14162 830 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 ERFEQ4G0M1 354 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
PTPN2-203ENST00000353319 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
PTPN2-203ENST00000353319 SETDB2Q96T68 719 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 SEC62Q99442 399 aaKnown RBP12.61□□□□□ -0.39
PTPN2-203ENST00000353319 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 ARAP2Q8WZ64 1704 aa12.61□□□□□ -0.39
PTPN2-203ENST00000353319 SLC5A1P13866 664 aa12.6□□□□□ -0.39
PTPN2-203ENST00000353319 PTMSP20962 102 aa12.6□□□□□ -0.39
PTPN2-203ENST00000353319 MCAMP43121 646 aa12.6□□□□□ -0.39
PTPN2-203ENST00000353319 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
PTPN2-203ENST00000353319 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
PTPN2-203ENST00000353319 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
PTPN2-203ENST00000353319 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 CHGBP05060 677 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 ANKRD1Q15327 319 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 TRAPPC3LQ5T215 181 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
PTPN2-203ENST00000353319 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
PTPN2-203ENST00000353319 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
PTPN2-203ENST00000353319 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
PTPN2-203ENST00000353319 RPS6KB1P23443 525 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 BLOC1S2Q6QNY1 142 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 APPBP2Q92624 585 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPN2-203ENST00000353319 SRP68Q9UHB9 627 aaKnown RBP12.58□□□□□ -0.4
PTPN2-203ENST00000353319 MAST3O60307 1309 aa12.58□□□□□ -0.4
PTPN2-203ENST00000353319 CYP21A2P08686 494 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 RFC4P35249 363 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 PHKA1P46020 1223 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 CHRNDQ07001 517 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 UBE3CQ15386 1083 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-203ENST00000353319 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 ZDHHC9Q9Y397 364 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-203ENST00000353319 HMGB1P09429 215 aaKnown RBP12.57□□□□□ -0.4
PTPN2-203ENST00000353319 CPA1P15085 419 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-203ENST00000353319 ADD2P35612 726 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 UBE4AQ14139 1066 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 GSE1Q14687 1217 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 SMIM5Q71RC9 77 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 AMIGO3Q86WK7 504 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 NBPF5PQ86XG9 351 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-203ENST00000353319 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 CTNNA3Q9UI47 895 aa12.57□□□□□ -0.4
PTPN2-203ENST00000353319 M0R2C6 588 aa12.56□□□□□ -0.4
PTPN2-203ENST00000353319 ZBTB22O15209 634 aa12.56□□□□□ -0.4
PTPN2-203ENST00000353319 BAG4O95429 457 aaKnown RBP12.56□□□□□ -0.4
PTPN2-203ENST00000353319 BRD1O95696 1058 aa12.56□□□□□ -0.4
PTPN2-203ENST00000353319 SLFNL1Q499Z3 407 aa12.56□□□□□ -0.4
PTPN2-203ENST00000353319 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
PTPN2-203ENST00000353319 SPATA5Q8NB90 893 aa12.56□□□□□ -0.4
PTPN2-203ENST00000353319 MYH7P12883 1935 aa12.55□□□□□ -0.4
PTPN2-203ENST00000353319 PDIA4P13667 645 aaKnown RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 DEKP35659 375 aaKnown RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 RPS8P62241 208 aaKnown RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 RBM6P78332 1123 aaKnown RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 PKP1Q13835 747 aa12.55□□□□□ -0.4
PTPN2-203ENST00000353319 SKOR2Q2VWA4 1001 aaPredicted RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
PTPN2-203ENST00000353319 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
PTPN2-203ENST00000353319 MINPP1Q9UNW1 487 aa12.55□□□□□ -0.4
PTPN2-203ENST00000353319 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
PTPN2-203ENST00000353319 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
PTPN2-203ENST00000353319 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 GOLGA6L22H0YM25 854 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 TRAK2O60296 914 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 TM4SF1P30408 202 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 SLC9C2Q5TAH2 1124 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 PUS7LQ9H0K6 701 aaKnown RBP12.54□□□□□ -0.4
PTPN2-203ENST00000353319 PIH1D3Q9NQM4 214 aaKnown RBP12.54□□□□□ -0.4
PTPN2-203ENST00000353319 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
PTPN2-203ENST00000353319 CASZ1Q86V15 1759 aa12.53□□□□□ -0.4
PTPN2-203ENST00000353319 TCRBV5S4A2TA0A5A2 114 aa12.53□□□□□ -0.4
PTPN2-203ENST00000353319 FOXP2O15409 715 aa12.53□□□□□ -0.4
PTPN2-203ENST00000353319 RASGRF1Q13972 1273 aa12.53□□□□□ -0.4
PTPN2-203ENST00000353319 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
PTPN2-203ENST00000353319 ME3Q16798 604 aa12.53□□□□□ -0.4
PTPN2-203ENST00000353319 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
PTPN2-203ENST00000353319 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
PTPN2-203ENST00000353319 UBR3Q6ZT12 1888 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms