RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 KARSQ15046 597 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 PLEKHA4Q9H4M7 779 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 PDE11AQ9HCR9 933 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 PHLPP2Q6ZVD8 1323 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 ANXA1P04083 346 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 FANCCQ00597 558 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 TOB2Q14106 344 aaPredicted RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 LONRF2Q1L5Z9 754 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 MRPS27Q92552 414 aaKnown RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 SECISBP2LQ93073 1101 aaKnown RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 EXOC4Q96A65 974 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 PPLO60437 1756 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 TTC41PQ6P2S7 1318 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 SOCS7O14512 581 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 ATP8B1O43520 1251 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 HSPA2P54652 639 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 JAKMIP3Q5VZ66 844 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 TTLL5Q6EMB2 1281 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 CCDC12Q8WUD4 166 aaPredicted RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 NUDT16Q96DE0 195 aaKnown RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 A0A0D9SFI3 127 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 HIP1O00291 1037 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 POLR3DP05423 398 aaPredicted RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 ATP1A3P13637 1013 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 GOLGA1Q92805 767 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 MAP4K1Q92918 833 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 LTV1Q96GA3 475 aaPredicted RBP8.83□□□□□ -1
BRCA1-201ENST00000352993 NEK1Q96PY6 1258 aa8.83□□□□□ -1
BRCA1-201ENST00000352993 EIF3JO75822 258 aaKnown RBP8.82□□□□□ -1
BRCA1-201ENST00000352993 G3BP1Q13283 466 aaKnown RBP eCLIP8.82□□□□□ -1
BRCA1-201ENST00000352993 H3BQF6 201 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 NUTM2GQ5VZR2 741 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 TXNDC2Q86VQ3 553 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 ERC1Q8IUD2 1116 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 TEX2Q8IWB9 1127 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 REXO1L1PQ8IX06 675 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 MYCBPQ99417 103 aaPredicted RBP8.82□□□□□ -1
BRCA1-201ENST00000352993 PI4KAP2A4QPH2 592 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 AMPHP49418 695 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 DHX8Q14562 1220 aaKnown RBP8.82□□□□□ -1
BRCA1-201ENST00000352993 PI4KAP1Q8N8J0 262 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 RCOR1Q9UKL0 485 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 PARP3Q9Y6F1 533 aa8.82□□□□□ -1
BRCA1-201ENST00000352993 NDUFA8P51970 172 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 TEFQ10587 303 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 WWC2Q6AWC2 1192 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 SEC62Q99442 399 aaKnown RBP8.81□□□□□ -1
BRCA1-201ENST00000352993 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 FAN1Q9Y2M0 1017 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 CDK12Q9NYV4 1490 aaPredicted RBP8.81□□□□□ -1
BRCA1-201ENST00000352993 EIF3CLB5ME19 914 aaKnown RBP8.81□□□□□ -1
BRCA1-201ENST00000352993 RHOXF2BP0C7M4 288 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 MICALL1Q8N3F8 863 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 EDC3Q96F86 508 aaKnown RBP8.81□□□□□ -1
BRCA1-201ENST00000352993 WDR24Q96S15 920 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 EIF3CQ99613 913 aaKnown RBP8.81□□□□□ -1
BRCA1-201ENST00000352993 RHOXF2Q9BQY4 288 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 FUT8Q9BYC5 575 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 NCOA5Q9HCD5 579 aaKnown RBP8.81□□□□□ -1
BRCA1-201ENST00000352993 PPP2R2CQ9Y2T4 447 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 CDC42BPGQ6DT37 1551 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 PTPDC1A2A3K4 754 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 CBFA2T2O43439 604 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 ERLIN1O75477 346 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 OTUD7BQ6GQQ9 843 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 SYNE3Q6ZMZ3 975 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 PACS2Q86VP3 889 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 DHX58Q96C10 678 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 MPHOSPH8Q99549 860 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 DESI2Q9BSY9 194 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 PCDHA7Q9UN72 937 aa8.81□□□□□ -1
BRCA1-201ENST00000352993 PHLPP1O60346 1717 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.8□□□□□ -1
BRCA1-201ENST00000352993 WASLO00401 505 aaPredicted RBP8.8□□□□□ -1
BRCA1-201ENST00000352993 MAGEA9P43362 315 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 APOBRQ0VD83 1088 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 SCRN1Q12765 414 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 POLA2Q14181 598 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 KRT32Q14532 448 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 TRIM65Q6PJ69 517 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 LZTFL1Q9NQ48 299 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 CCDC61Q9Y6R9 512 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 ANKRD26Q9UPS8 1709 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 ATP7BP35670 1465 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 HDXQ7Z353 690 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 ZNF589Q86UQ0 364 aaPredicted RBP8.8□□□□□ -1
BRCA1-201ENST00000352993 DNAAF4Q8WXU2 420 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 PPM1EQ8WY54 764 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 RABGGTAQ92696 567 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 GEMIN8Q9NWZ8 242 aaKnown RBP8.8□□□□□ -1
BRCA1-201ENST00000352993 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.8□□□□□ -1
BRCA1-201ENST00000352993 KIF20BQ96Q89 1820 aa8.8□□□□□ -1
BRCA1-201ENST00000352993 N4BP1O75113 896 aaKnown RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 GIGYF1O75420 1035 aaPredicted RBP8.79□□□□□ -1
BRCA1-201ENST00000352993 OLFM4Q6UX06 510 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 CCDC129Q6ZRS4 1044 aa8.79□□□□□ -1
BRCA1-201ENST00000352993 CHST3Q7LGC8 479 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms