RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CCDC129Q6ZRS4 1044 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 LPIN2Q92539 896 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 ZSCAN31Q96LW9 406 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-203ENST00000350034 BCL11BQ9C0K0 894 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-203ENST00000350034 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 PDRG1Q9NUG6 133 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 CCNL1Q9UK58 526 aaPredicted RBP8.29□□□□□ -1.08
TRIM55-203ENST00000350034 CYP46A1Q9Y6A2 500 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 TAF6LQ9Y6J9 622 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 SCN7AQ01118 1682 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 BTAF1O14981 1849 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 MAST3O60307 1309 aa8.29□□□□□ -1.08
TRIM55-203ENST00000350034 LAMB2P55268 1798 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 BAG4O95429 457 aaKnown RBP8.28□□□□□ -1.08
TRIM55-203ENST00000350034 BRD1O95696 1058 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 CPA1P15085 419 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 PTMSP20962 102 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 RPS6KB1P23443 525 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 MCAMP43121 646 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 KCNJ4P48050 445 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 ST3GAL1Q11201 340 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 PKP1Q13835 747 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-203ENST00000350034 SLFNL1Q499Z3 407 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 GORABQ5T7V8 394 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 TBC1D9BQ66K14 1250 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 APPBP2Q92624 585 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 OSBP2Q969R2 916 aa8.28□□□□□ -1.08
TRIM55-203ENST00000350034 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-203ENST00000350034 DDX60Q8IY21 1712 aaKnown RBP8.28□□□□□ -1.08
TRIM55-203ENST00000350034 MYH3P11055 1940 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 LY75O60449 1722 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 KAT6BQ8WYB5 2073 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 FAM177BA6PVY3 158 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 M0R2C6 588 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 GNPATO15228 680 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 FOXP2O15409 715 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 TRAK2O60296 914 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 CYP21A2P08686 494 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 HSPD1P10809 573 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 SLC5A1P13866 664 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 HSPA6P17066 643 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 PHKA1P46020 1223 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 TTF1Q15361 905 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 UBE3CQ15386 1083 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 BLOC1S2Q6QNY1 142 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 C3orf67Q6ZVT6 689 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 AMIGO3Q86WK7 504 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 CDC5LQ99459 802 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 MPHOSPH8Q99549 860 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 NYXQ9GZU5 481 aa8.27□□□□□ -1.09
TRIM55-203ENST00000350034 PIH1D3Q9NQM4 214 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 RTCBQ9Y3I0 505 aaKnown RBP8.27□□□□□ -1.09
TRIM55-203ENST00000350034 COL24A1Q17RW2 1714 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 ZBTB22O15209 634 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 LARGE1O95461 756 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 ADD2P35612 726 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 CHRNDQ07001 517 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 TOB2Q14106 344 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-203ENST00000350034 ANKRD1Q15327 319 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 ME3Q16798 604 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 PI16Q6UXB8 463 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 STOX1Q6ZVD7 989 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 SMIM5Q71RC9 77 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
TRIM55-203ENST00000350034 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-203ENST00000350034 NEK1Q96PY6 1258 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 BSDC1Q9NW68 430 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-203ENST00000350034 TPCN1Q9ULQ1 816 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 ARAP2Q8WZ64 1704 aa8.26□□□□□ -1.09
TRIM55-203ENST00000350034 COL4A1P02462 1669 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 TCRBV5S4A2TA0A5A2 114 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 ZPR1O75312 459 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 EXOSC10Q01780 885 aaKnown RBP8.25□□□□□ -1.09
TRIM55-203ENST00000350034 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
TRIM55-203ENST00000350034 SKOR2Q2VWA4 1001 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-203ENST00000350034 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 ZSCAN25Q6NSZ9 544 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 FAM196AQ6ZSG2 479 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 ANKRD18AQ8IVF6 992 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 SETDB2Q96T68 719 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 AGXT2Q9BYV1 514 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRIM55-203ENST00000350034 LRRC4BQ9NT99 713 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.25□□□□□ -1.09
TRIM55-203ENST00000350034 ZNF804BA4D1E1 1349 aa8.25□□□□□ -1.09
TRIM55-203ENST00000350034 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 C4BP0C0L5 1744 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
TRIM55-203ENST00000350034 PDE6AP16499 860 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 TM4SF1P30408 202 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 RASGRF1Q13972 1273 aa8.24□□□□□ -1.09
TRIM55-203ENST00000350034 UBE4AQ14139 1066 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms