RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 UQCRHP07919 91 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 CES1P23141 567 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 ZMYM3Q14202 1370 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
RFC1-201ENST00000349703 ATRIPQ8WXE1 791 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 NUDT12Q9BQG2 462 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 FTOQ9C0B1 505 aaKnown RBP eCLIP6.94□□□□□ -1.3
RFC1-201ENST00000349703 KRT84Q9NSB2 600 aa6.94□□□□□ -1.3
RFC1-201ENST00000349703 CADPSQ9ULU8 1353 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 C21orf2O43822 256 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 ZKSCAN1P17029 563 aaPredicted RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 GJA8P48165 433 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 EIF6P56537 245 aaKnown RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 HS1BP3Q53T59 392 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 HSP90AA5PQ58FG0 334 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 TRIM22Q8IYM9 498 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 UBAP1LF5GYI3 381 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 FAM193AP78312 1265 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 BPHLQ86WA6 291 aaPredicted RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 RTF1Q92541 710 aaKnown RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 TATDN2Q93075 761 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 NKD1Q969G9 470 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 EMILIN3Q9NT22 766 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 INTUQ9ULD6 942 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 ZMYM4Q5VZL5 1548 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 RALGAPBQ86X10 1494 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 CCDC144AA2RUR9 1427 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 B4DLN1 442 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 RXRBP28702 533 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 PTGDRQ13258 359 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 RSRC2Q7L4I2 434 aaKnown RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 FSD1Q9BTV5 496 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 PRKD2Q9BZL6 878 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 CABP5Q9NP86 173 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 DAPK1P53355 1430 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 GAS7O60861 476 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 NBPF11Q86T75 865 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 MS4A3Q96HJ5 214 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 EIF3CQ99613 913 aaKnown RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 ZC3H12CQ9C0D7 883 aaKnown RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 PIDD1Q9HB75 910 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.93□□□□□ -1.3
RFC1-201ENST00000349703 FRMD4BQ9Y2L6 1034 aa6.93□□□□□ -1.3
RFC1-201ENST00000349703 CC2D2AQ9P2K1 1620 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 MAP7D1Q3KQU3 841 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 SASS6Q6UVJ0 657 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 TPTE2Q6XPS3 522 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 TBC1D32Q96NH3 1257 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 NDOR1Q9UHB4 597 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 SNX16P57768 344 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 TMPRSS15P98073 1019 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 GOLGA8DPQ0D2H9 430 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 DHX8Q14562 1220 aaKnown RBP6.92□□□□□ -1.3
RFC1-201ENST00000349703 LONRF3Q496Y0 759 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 NUDT16L1Q9BRJ7 211 aaKnown RBP6.92□□□□□ -1.3
RFC1-201ENST00000349703 SDF4Q9BRK5 362 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 CRISPLD2Q9H0B8 497 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 PTPRKQ15262 1439 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 KIF14Q15058 1648 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 UGGT2Q9NYU1 1516 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 NKTRP30414 1462 aaKnown RBP6.92□□□□□ -1.3
RFC1-201ENST00000349703 MYO1CO00159 1063 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 AP3D1O14617 1153 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 IRS4O14654 1257 aaPredicted RBP6.92□□□□□ -1.3
RFC1-201ENST00000349703 TIPRLO75663 272 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 OFD1O75665 1012 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 POTEJP0CG39 1038 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
RFC1-201ENST00000349703 FUT2Q10981 343 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 TPD52L1Q16890 204 aaPredicted RBP6.92□□□□□ -1.3
RFC1-201ENST00000349703 RGL3Q3MIN7 710 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 ADAM32Q8TC27 787 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 IP6K2Q9UHH9 426 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 KIF16BQ96L93 1317 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 PHKA2P46019 1235 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 PTPN5P54829 565 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 CCDC149Q6ZUS6 474 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 IQCA1Q86XH1 822 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 GPRASP2Q96D09 838 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 PGPEP1Q9NXJ5 209 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 DAAM1Q9Y4D1 1078 aa6.92□□□□□ -1.3
RFC1-201ENST00000349703 PARD3Q8TEW0 1356 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 PSMA7O14818 248 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
RFC1-201ENST00000349703 AMPD1P23109 780 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 PER3P56645 1201 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 EN1Q05925 392 aaPredicted RBP6.91□□□□□ -1.3
RFC1-201ENST00000349703 DPY19L2Q6NUT2 758 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 DMRTB1Q96MA1 342 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 ITM2BQ9Y287 266 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 TTC24A2A3L6 582 aaPredicted RBP6.91□□□□□ -1.3
RFC1-201ENST00000349703 CRCPO75575 148 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 TPM3P06753 285 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 PMS1P54277 932 aaKnown RBP6.91□□□□□ -1.3
RFC1-201ENST00000349703 ZKSCAN2Q63HK3 967 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 PCSK9Q8NBP7 692 aaKnown RBP6.91□□□□□ -1.3
RFC1-201ENST00000349703 UCMAQ8WVF2 138 aa6.91□□□□□ -1.3
RFC1-201ENST00000349703 SCUBE2Q9NQ36 999 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms