RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 BICC1Q9H694 974 aaKnown RBP18.62■□□□□ 0.57
HMGA1-202ENST00000347617 SNRKQ9NRH2 765 aa18.62■□□□□ 0.57
HMGA1-202ENST00000347617 DACT1Q9NYF0 836 aa18.62■□□□□ 0.57
HMGA1-202ENST00000347617 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
HMGA1-202ENST00000347617 TERF2Q15554 542 aa18.61■□□□□ 0.57
HMGA1-202ENST00000347617 CWC25Q9NXE8 425 aaPredicted RBP18.61■□□□□ 0.57
HMGA1-202ENST00000347617 DOT1LQ8TEK3 1739 aa18.61■□□□□ 0.57
HMGA1-202ENST00000347617 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
HMGA1-202ENST00000347617 A0A087WZG4 1122 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 GOLGA6L19H0YKK7 550 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 ME3Q16798 604 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
HMGA1-202ENST00000347617 EVI5LQ96CN4 794 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 C8orf37Q96NL8 207 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 ISCA1Q9BUE6 129 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 FGD1P98174 961 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 TCIRG1Q13488 830 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 PTPN14Q15678 1187 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 NYAP1Q6ZVC0 841 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 LEO1Q8WVC0 666 aaPredicted RBP18.6■□□□□ 0.57
HMGA1-202ENST00000347617 SLC4A9Q96Q91 983 aa18.6■□□□□ 0.57
HMGA1-202ENST00000347617 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
HMGA1-202ENST00000347617 IL6STP40189 918 aaPredicted RBP18.59■□□□□ 0.57
HMGA1-202ENST00000347617 LRMPQ12912 555 aa18.59■□□□□ 0.57
HMGA1-202ENST00000347617 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
HMGA1-202ENST00000347617 KIF6Q6ZMV9 814 aa18.59■□□□□ 0.57
HMGA1-202ENST00000347617 LRRC8AQ8IWT6 810 aa18.59■□□□□ 0.57
HMGA1-202ENST00000347617 CACTINQ8WUQ7 758 aaKnown RBP18.59■□□□□ 0.57
HMGA1-202ENST00000347617 COPRSQ9NQ92 184 aa18.59■□□□□ 0.57
HMGA1-202ENST00000347617 ECHDC1Q9NTX5 307 aa18.59■□□□□ 0.57
HMGA1-202ENST00000347617 CALCOCO1Q9P1Z2 691 aa18.59■□□□□ 0.57
HMGA1-202ENST00000347617 GSDMDP57764 484 aa18.58■□□□□ 0.57
HMGA1-202ENST00000347617 ST3GAL1Q11201 340 aa18.58■□□□□ 0.57
HMGA1-202ENST00000347617 HSP90AB3PQ58FF7 597 aa18.58■□□□□ 0.57
HMGA1-202ENST00000347617 CLASRPQ8N2M8 674 aaKnown RBP18.58■□□□□ 0.57
HMGA1-202ENST00000347617 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.57
HMGA1-202ENST00000347617 ZSCAN16Q9H4T2 348 aaPredicted RBP18.58■□□□□ 0.57
HMGA1-202ENST00000347617 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.57
HMGA1-202ENST00000347617 A0A0U1RQG5 324 aaPredicted RBP18.58■□□□□ 0.56
HMGA1-202ENST00000347617 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
HMGA1-202ENST00000347617 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.56
HMGA1-202ENST00000347617 STX1AQ16623 288 aa18.58■□□□□ 0.56
HMGA1-202ENST00000347617 USP21Q9UK80 565 aa18.58■□□□□ 0.56
HMGA1-202ENST00000347617 CFAP45Q9UL16 551 aa18.58■□□□□ 0.56
HMGA1-202ENST00000347617 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 ZNF831Q5JPB2 1677 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 ATP5J2-PTCD1G3V325 749 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 MAP4K4O95819 1239 aaPredicted RBP18.57■□□□□ 0.56
HMGA1-202ENST00000347617 CAMK4Q16566 473 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 TPRNQ4KMQ1 711 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 CREB3L3Q68CJ9 461 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 CDC37L1Q7L3B6 337 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 MAP4K1Q92918 833 aa18.57■□□□□ 0.56
HMGA1-202ENST00000347617 SLU7O95391 586 aaKnown RBP18.56■□□□□ 0.56
HMGA1-202ENST00000347617 KCNJ6P48051 423 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 PTH1RQ03431 593 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 ATL3Q6DD88 541 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 GIGYF2Q6Y7W6 1299 aaKnown RBP18.56■□□□□ 0.56
HMGA1-202ENST00000347617 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 CKAP2LQ8IYA6 745 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 NRBP1Q9UHY1 535 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 TPCN1Q9ULQ1 816 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 RBM8AQ9Y5S9 174 aaKnown RBP18.56■□□□□ 0.56
HMGA1-202ENST00000347617 TJP1Q07157 1748 aa18.56■□□□□ 0.56
HMGA1-202ENST00000347617 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
HMGA1-202ENST00000347617 FAM98CQ17RN3 349 aaKnown RBP18.55■□□□□ 0.56
HMGA1-202ENST00000347617 ADCK5Q3MIX3 580 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 BLOC1S2Q6QNY1 142 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 BICD2Q8TD16 824 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 TSPYL1Q9H0U9 437 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 IMPACTQ9P2X3 320 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 KCNJ4P48050 445 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 RFX5P48382 616 aaPredicted RBP18.55■□□□□ 0.56
HMGA1-202ENST00000347617 KRT32Q14532 448 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 BMS1Q14692 1282 aaKnown RBP18.55■□□□□ 0.56
HMGA1-202ENST00000347617 IQCB1Q15051 598 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 EPHA10Q5JZY3 1008 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 TIGD1Q96MW7 591 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 ZBTB3Q9H5J0 574 aa18.55■□□□□ 0.56
HMGA1-202ENST00000347617 ONECUT3O60422 494 aaPredicted RBP18.54■□□□□ 0.56
HMGA1-202ENST00000347617 CPA1P15085 419 aa18.54■□□□□ 0.56
HMGA1-202ENST00000347617 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
HMGA1-202ENST00000347617 SLC20A2Q08357 652 aa18.54■□□□□ 0.56
HMGA1-202ENST00000347617 PLA2G12BQ9BX93 195 aa18.54■□□□□ 0.56
HMGA1-202ENST00000347617 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
HMGA1-202ENST00000347617 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
HMGA1-202ENST00000347617 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 SIK1P57059 783 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 FOXO4P98177 505 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 LARP6Q9BRS8 491 aaKnown RBP18.53■□□□□ 0.56
HMGA1-202ENST00000347617 SLC27A2O14975 620 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 NRDCO43847 1150 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 PCCAP05165 728 aaPredicted RBP18.53■□□□□ 0.56
HMGA1-202ENST00000347617 EIF5P55010 431 aaKnown RBP18.53■□□□□ 0.56
HMGA1-202ENST00000347617 KMT5BQ4FZB7 885 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 NECAB1Q8N987 351 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
HMGA1-202ENST00000347617 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.56
HMGA1-202ENST00000347617 RREB1Q92766 1687 aa18.52■□□□□ 0.56
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