RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RNF181Q9P0P0 153 aa14.69□□□□□ -0.06
SNCA-202ENST00000345009 CACNA1SQ13698 1873 aa14.68□□□□□ -0.06
SNCA-202ENST00000345009 PPIP5K2O43314 1243 aa14.68□□□□□ -0.06
SNCA-202ENST00000345009 IL15P40933 162 aaPredicted RBP14.68□□□□□ -0.06
SNCA-202ENST00000345009 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
SNCA-202ENST00000345009 RFX5P48382 616 aaPredicted RBP14.68□□□□□ -0.06
SNCA-202ENST00000345009 METTL24Q5JXM2 366 aa14.68□□□□□ -0.06
SNCA-202ENST00000345009 RIPOR2Q9Y4F9 1068 aa14.68□□□□□ -0.06
SNCA-202ENST00000345009 ZC3H4Q9UPT8 1303 aaKnown RBP14.67□□□□□ -0.06
SNCA-202ENST00000345009 TAF1P21675 1872 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 OS9Q13438 667 aaPredicted RBP14.67□□□□□ -0.06
SNCA-202ENST00000345009 HSP90AB4PQ58FF6 505 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 LHX8Q68G74 356 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 CEP85Q6P2H3 762 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 NIM1KQ8IY84 436 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 KLHDC4Q8TBB5 520 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 SSH3Q8TE77 659 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 SIL1Q9H173 461 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 CEP126Q9P2H0 1117 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 POLLQ9UGP5 575 aa14.67□□□□□ -0.06
SNCA-202ENST00000345009 ZNF804BA4D1E1 1349 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 SURF6O75683 361 aaKnown RBP14.66□□□□□ -0.06
SNCA-202ENST00000345009 KIAA2012Q0VF49 1180 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 UBE4AQ14139 1066 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 DPY19L2Q6NUT2 758 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 IFNL1Q8IU54 200 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 CRBNQ96SW2 442 aa14.66□□□□□ -0.06
SNCA-202ENST00000345009 PUS3Q9BZE2 481 aaKnown RBP14.66□□□□□ -0.06
SNCA-202ENST00000345009 PDE8BO95263 885 aa14.65□□□□□ -0.06
SNCA-202ENST00000345009 POTEIP0CG38 1075 aa14.65□□□□□ -0.06
SNCA-202ENST00000345009 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
SNCA-202ENST00000345009 HELBQ8NG08 1087 aaPredicted RBP14.65□□□□□ -0.06
SNCA-202ENST00000345009 FER1L6Q2WGJ9 1857 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 RIMBP2O15034 1052 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 TAF5LO75529 589 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
SNCA-202ENST00000345009 EIF6P56537 245 aaKnown RBP14.64□□□□□ -0.07
SNCA-202ENST00000345009 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
SNCA-202ENST00000345009 AOC3Q16853 763 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 ERC1Q8IUD2 1116 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 ZNRF3Q9ULT6 936 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 PA2G4Q9UQ80 394 aaKnown RBP14.64□□□□□ -0.07
SNCA-202ENST00000345009 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 CHD4Q14839 1912 aa14.64□□□□□ -0.07
SNCA-202ENST00000345009 YY1P25490 414 aa14.63□□□□□ -0.07
SNCA-202ENST00000345009 ATG9AQ7Z3C6 839 aa14.63□□□□□ -0.07
SNCA-202ENST00000345009 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
SNCA-202ENST00000345009 TRPC6Q9Y210 931 aa14.63□□□□□ -0.07
SNCA-202ENST00000345009 NOP58Q9Y2X3 529 aaKnown RBP14.63□□□□□ -0.07
SNCA-202ENST00000345009 SNED1Q8TER0 1413 aa14.63□□□□□ -0.07
SNCA-202ENST00000345009 TNIP1Q15025 636 aa14.62□□□□□ -0.07
SNCA-202ENST00000345009 CAVIN4Q5BKX8 364 aa14.62□□□□□ -0.07
SNCA-202ENST00000345009 C15orf52Q6ZUT6 534 aaKnown RBP14.62□□□□□ -0.07
SNCA-202ENST00000345009 ZNF804AQ7Z570 1209 aa14.62□□□□□ -0.07
SNCA-202ENST00000345009 PODNQ7Z5L7 613 aa14.62□□□□□ -0.07
SNCA-202ENST00000345009 VPS37DQ86XT2 251 aa14.62□□□□□ -0.07
SNCA-202ENST00000345009 COA1Q9GZY4 146 aa14.62□□□□□ -0.07
SNCA-202ENST00000345009 MED23Q9ULK4 1368 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 LRRC37AA6NMS7 1700 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 FZD9O00144 591 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 NEFLP07196 543 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
SNCA-202ENST00000345009 SLC5A1P13866 664 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 SLC51AQ86UW1 340 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 LPIN2Q92539 896 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
SNCA-202ENST00000345009 RAB11FIP3O75154 756 aa14.6□□□□□ -0.07
SNCA-202ENST00000345009 PRELPP51888 382 aa14.6□□□□□ -0.07
SNCA-202ENST00000345009 ATP2B3Q16720 1220 aa14.6□□□□□ -0.07
SNCA-202ENST00000345009 VGLL2Q8N8G2 317 aa14.6□□□□□ -0.07
SNCA-202ENST00000345009 SBF1O95248 1867 aa14.59□□□□□ -0.07
SNCA-202ENST00000345009 ECE2O60344 883 aa14.59□□□□□ -0.07
SNCA-202ENST00000345009 HIBADHP31937 336 aaKnown RBP14.59□□□□□ -0.07
SNCA-202ENST00000345009 TFCP2Q12800 502 aa14.59□□□□□ -0.07
SNCA-202ENST00000345009 DOK7Q18PE1 504 aa14.59□□□□□ -0.07
SNCA-202ENST00000345009 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
SNCA-202ENST00000345009 GPR101Q96P66 508 aaPredicted RBP14.59□□□□□ -0.07
SNCA-202ENST00000345009 DBNDD1Q9H9R9 158 aa14.59□□□□□ -0.07
SNCA-202ENST00000345009 GNL3LQ9NVN8 582 aaKnown RBP14.59□□□□□ -0.07
SNCA-202ENST00000345009 COL4A1P02462 1669 aa14.58□□□□□ -0.07
SNCA-202ENST00000345009 SPEF2Q9C093 1822 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 GLTPD2A6NH11 291 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 FRAT2O75474 233 aaPredicted RBP14.58□□□□□ -0.08
SNCA-202ENST00000345009 GORABQ5T7V8 394 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 CIAPIN1Q6FI81 312 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 SIRT2Q8IXJ6 389 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 GPC2Q8N158 579 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 EXOC6Q8TAG9 804 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 RWDD1Q9H446 243 aaPredicted RBP14.58□□□□□ -0.08
SNCA-202ENST00000345009 GPR108Q9NPR9 543 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 EXOC6BQ9Y2D4 811 aa14.58□□□□□ -0.08
SNCA-202ENST00000345009 SNAP23O00161 211 aa14.57□□□□□ -0.08
SNCA-202ENST00000345009 FGFR2P21802 821 aa14.57□□□□□ -0.08
SNCA-202ENST00000345009 NEUROD6Q96NK8 337 aa14.57□□□□□ -0.08
SNCA-202ENST00000345009 CD209Q9NNX6 404 aa14.57□□□□□ -0.08
SNCA-202ENST00000345009 PCDHB15Q9Y5E8 787 aa14.57□□□□□ -0.08
SNCA-202ENST00000345009 GJA3Q9Y6H8 435 aa14.57□□□□□ -0.08
SNCA-202ENST00000345009 CCDC88AQ3V6T2 1871 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms