RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PHKBQ93100 1093 aa14.33□□□□□ -0.12
SNRNP48-201ENST00000342415 A0A1B0GUL7 405 aa14.33□□□□□ -0.12
SNRNP48-201ENST00000342415 DDX17Q92841 729 aaKnown RBP14.33□□□□□ -0.12
SNRNP48-201ENST00000342415 UNC13BO14795 1591 aa14.33□□□□□ -0.12
SNRNP48-201ENST00000342415 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
SNRNP48-201ENST00000342415 PATL2C9JE40 543 aaKnown RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 ZBTB43O43298 467 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 A1BGP04217 495 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 CLASP1Q7Z460 1538 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 NUP88Q99567 741 aaPredicted RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 ACBD3Q9H3P7 528 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 PUF60Q9UHX1 559 aaKnown RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 KIF5CO60282 957 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 TXLNAP40222 546 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 EIF5P55010 431 aaKnown RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 ERCC6LQ2NKX8 1250 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 ZNF397Q8NF99 534 aaPredicted RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 MAP4K1Q92918 833 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 XPO4Q9C0E2 1151 aaKnown RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 CWC15Q9P013 229 aaKnown RBP14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 KIF1BO60333 1816 aa14.32□□□□□ -0.12
SNRNP48-201ENST00000342415 E9PCH4 1651 aa14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 OGFRQ9NZT2 677 aa14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 ENOX2Q16206 610 aaKnown RBP14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 ATP2B3Q16720 1220 aa14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 CHGBP05060 677 aa14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 C11orf57Q6ZUT1 292 aaPredicted RBP14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 NLRP1Q9C000 1473 aa14.31□□□□□ -0.12
SNRNP48-201ENST00000342415 ABCA6Q8N139 1617 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 CYP21A2P08686 494 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 CENPHQ9H3R5 247 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 TMOD3Q9NYL9 352 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 B4E1Z4 1266 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 ERLIN1O75477 346 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 DHX58Q96C10 678 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 CARD6Q9BX69 1037 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 DEF6Q9H4E7 631 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 ZHX3Q9H4I2 956 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 DBNLQ9UJU6 430 aaKnown RBP14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 ZNF202O95125 648 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 GOLGA8FQ08AF8 430 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 GOLGA8DPQ0D2H9 430 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 SCRN1Q12765 414 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 GJB4Q9NTQ9 266 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 LRRC7Q96NW7 1537 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 TAF5LO75529 589 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 SASH1O94885 1247 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 SSBP05455 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 MAP3K12Q12852 859 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 KIAA1328Q86T90 577 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 KBTBD3Q8NAB2 608 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 MIGA1Q8NAN2 632 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 ZNHIT6Q9NWK9 470 aaKnown RBP14.3□□□□□ -0.12
SNRNP48-201ENST00000342415 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 AMOTL1Q8IY63 956 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 AATKQ6ZMQ8 1374 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 GPHNQ9NQX3 736 aaPredicted RBP14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 ANKRD18BA2A2Z9 1011 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 E7EWF7 191 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 STARD3NLO95772 234 aa14.29□□□□□ -0.12
SNRNP48-201ENST00000342415 hCG_1642624A0A1W2PR95 340 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 N4BP3O15049 544 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 FANCCQ00597 558 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 MFSD6Q6ZSS7 791 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 TRMT44Q8IYL2 757 aaKnown RBP14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 WASF1Q92558 559 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 FEZ1Q99689 392 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 SSH2Q76I76 1423 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 H0YHG0 523 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 LRRC8AQ8IWT6 810 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 STAMQ92783 540 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 NECTIN1Q15223 517 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 NOM1Q5C9Z4 860 aaKnown RBP14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 SETD1BQ9UPS6 1966 aaKnown RBP14.28□□□□□ -0.12
SNRNP48-201ENST00000342415 EIF3JO75822 258 aaKnown RBP14.27□□□□□ -0.12
SNRNP48-201ENST00000342415 CMTR1Q8N1G2 835 aaKnown RBP14.27□□□□□ -0.12
SNRNP48-201ENST00000342415 RHOXF2BP0C7M4 288 aa14.27□□□□□ -0.12
SNRNP48-201ENST00000342415 RHOXF2Q9BQY4 288 aa14.27□□□□□ -0.12
SNRNP48-201ENST00000342415 EVCP57679 992 aa14.27□□□□□ -0.13
SNRNP48-201ENST00000342415 ANO1Q5XXA6 986 aa14.27□□□□□ -0.13
SNRNP48-201ENST00000342415 GPIHBP1Q8IV16 184 aa14.27□□□□□ -0.13
SNRNP48-201ENST00000342415 MAPK8IP1Q9UQF2 711 aa14.27□□□□□ -0.13
SNRNP48-201ENST00000342415 IGSF1Q8N6C5 1336 aa14.27□□□□□ -0.13
SNRNP48-201ENST00000342415 TULP4Q9NRJ4 1543 aa14.27□□□□□ -0.13
SNRNP48-201ENST00000342415 NDUFA8P51970 172 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms