RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 ANAPC15P60006 121 aa20.72■□□□□ 0.91
FRMD4A-202ENST00000342409 RPS8P62241 208 aaKnown RBP20.72■□□□□ 0.91
FRMD4A-202ENST00000342409 FKBP4Q02790 459 aaKnown RBP eCLIP20.71■□□□□ 0.91
FRMD4A-202ENST00000342409 TICAM2Q86XR7 235 aa20.71■□□□□ 0.91
FRMD4A-202ENST00000342409 MCCP23508 829 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 EZH2Q15910 746 aaKnown RBP20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 SLC51AQ86UW1 340 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 RASEFQ8IZ41 740 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 KCNB2Q92953 911 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 LAMA4Q16363 1823 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 ZMYM1Q5SVZ6 1142 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 HSCBQ8IWL3 235 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 MAP4K1Q92918 833 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 ANO8Q9HCE9 1232 aaPredicted RBP20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 SNX14Q9Y5W7 946 aa20.7■□□□□ 0.9
FRMD4A-202ENST00000342409 COL11A2P13942 1736 aaPredicted RBP20.69■□□□□ 0.9
FRMD4A-202ENST00000342409 CYP2E1P05181 493 aaPredicted RBP20.69■□□□□ 0.9
FRMD4A-202ENST00000342409 EN1Q05925 392 aaPredicted RBP20.69■□□□□ 0.9
FRMD4A-202ENST00000342409 CRY2Q49AN0 593 aa20.69■□□□□ 0.9
FRMD4A-202ENST00000342409 LRRC37AA6NMS7 1700 aa20.68■□□□□ 0.9
FRMD4A-202ENST00000342409 NPHP1O15259 732 aa20.68■□□□□ 0.9
FRMD4A-202ENST00000342409 RNF113AO15541 343 aaKnown RBP20.68■□□□□ 0.9
FRMD4A-202ENST00000342409 UQCRFS1P1P0C7P4 283 aa20.68■□□□□ 0.9
FRMD4A-202ENST00000342409 NECTIN1Q15223 517 aa20.68■□□□□ 0.9
FRMD4A-202ENST00000342409 HMG20BQ9P0W2 317 aa20.68■□□□□ 0.9
FRMD4A-202ENST00000342409 BCAMP50895 628 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 UBE4AQ14139 1066 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 MCMDC2Q4G0Z9 681 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 PIH1D3Q9NQM4 214 aaKnown RBP20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 RBM8AQ9Y5S9 174 aaKnown RBP20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 RASGRF1Q13972 1273 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 FLAD1Q8NFF5 587 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 HELLSQ9NRZ9 838 aa20.67■□□□□ 0.9
FRMD4A-202ENST00000342409 CACNA1SQ13698 1873 aa20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 ZNF804BA4D1E1 1349 aa20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 ST5P78524 1137 aa20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 GRAPQ13588 217 aa20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 GRAPLQ8TC17 118 aaPredicted RBP20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 LTBP1Q14766 1721 aa20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 COL1A1P02452 1464 aaPredicted RBP20.66■□□□□ 0.9
FRMD4A-202ENST00000342409 MAST3O60307 1309 aa20.65■□□□□ 0.9
FRMD4A-202ENST00000342409 KLRG2A4D1S0 409 aaPredicted RBP20.65■□□□□ 0.9
FRMD4A-202ENST00000342409 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
FRMD4A-202ENST00000342409 NLGN1Q8N2Q7 840 aa20.65■□□□□ 0.9
FRMD4A-202ENST00000342409 OSBP2Q969R2 916 aa20.65■□□□□ 0.9
FRMD4A-202ENST00000342409 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
FRMD4A-202ENST00000342409 K7ELQ4 463 aaPredicted RBP20.64■□□□□ 0.9
FRMD4A-202ENST00000342409 M0R2C6 588 aa20.64■□□□□ 0.9
FRMD4A-202ENST00000342409 KLRK1P26718 216 aa20.64■□□□□ 0.9
FRMD4A-202ENST00000342409 SPATA5Q8NB90 893 aa20.64■□□□□ 0.9
FRMD4A-202ENST00000342409 GYG1P46976 350 aa20.64■□□□□ 0.89
FRMD4A-202ENST00000342409 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.89
FRMD4A-202ENST00000342409 SPRYD3Q8NCJ5 442 aa20.64■□□□□ 0.89
FRMD4A-202ENST00000342409 NEK4P51957 841 aa20.63■□□□□ 0.89
FRMD4A-202ENST00000342409 TAF6LQ9Y6J9 622 aa20.63■□□□□ 0.89
FRMD4A-202ENST00000342409 SLC27A2O14975 620 aa20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 SLC15A2Q16348 729 aa20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 VPS53Q5VIR6 699 aa20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 FAM84BQ96KN1 310 aaPredicted RBP20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 UPF3BQ9BZI7 483 aaKnown RBP20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 ANKRD2Q9GZV1 360 aa20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 SLKQ9H2G2 1235 aaPredicted RBP20.62■□□□□ 0.89
FRMD4A-202ENST00000342409 ZFYP08048 801 aaPredicted RBP20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 ADCK5Q3MIX3 580 aa20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 MMP10P09238 476 aa20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 ADD2P35612 726 aa20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 DDIT3P35638 169 aa20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 COL9A3Q14050 684 aaPredicted RBP20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 TTF1Q15361 905 aaPredicted RBP20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 MSL1Q68DK7 614 aa20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 FBXO33Q7Z6M2 555 aa20.61■□□□□ 0.89
FRMD4A-202ENST00000342409 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 FOXP2O15409 715 aa20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 ST18O60284 1047 aa20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 APPBP2Q92624 585 aa20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 RPGRQ92834 1020 aaKnown RBP20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 PUS7LQ9H0K6 701 aaKnown RBP20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 WWC3Q9ULE0 1092 aa20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 CCDC88AQ3V6T2 1871 aa20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 RPAP1Q9BWH6 1393 aaPredicted RBP20.6■□□□□ 0.89
FRMD4A-202ENST00000342409 DEFB132Q7Z7B7 95 aa20.59■□□□□ 0.89
FRMD4A-202ENST00000342409 TXNRD3Q86VQ6 643 aa20.59■□□□□ 0.89
FRMD4A-202ENST00000342409 TTC14Q96N46 770 aa20.59■□□□□ 0.89
FRMD4A-202ENST00000342409 IQSEC3Q9UPP2 1182 aaPredicted RBP20.59■□□□□ 0.89
FRMD4A-202ENST00000342409 PDE6AP16499 860 aa20.58■□□□□ 0.89
FRMD4A-202ENST00000342409 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.89
FRMD4A-202ENST00000342409 HSPD1P10809 573 aaKnown RBP20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 CPA1P15085 419 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 KCNJ4P48050 445 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 DSCC1Q9BVC3 393 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 BRIP1Q9BX63 1249 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 TM6SF1Q9BZW5 370 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 CHD4Q14839 1912 aa20.58■□□□□ 0.88
FRMD4A-202ENST00000342409 IDH1O75874 414 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms