RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 LPIN2Q92539 896 aa22.6■■□□□ 1.21
SEMA6C-201ENST00000341697 ACBD3Q9H3P7 528 aa22.6■■□□□ 1.21
SEMA6C-201ENST00000341697 AMPD3Q01432 767 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 SCLT1Q96NL6 688 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 RTL9Q8NET4 1388 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 AOX1Q06278 1338 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 WDR17Q8IZU2 1322 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 RBM26Q5T8P6 1007 aaKnown RBP22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 H0YIN7 160 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 DHX32Q7L7V1 743 aaKnown RBP22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 UBA5Q9GZZ9 404 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 RBM27Q9P2N5 1060 aaKnown RBP22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 BAG6P46379 1132 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 TTC6Q86TZ1 520 aa22.59■■□□□ 1.21
SEMA6C-201ENST00000341697 SNX21Q969T3 373 aa22.58■■□□□ 1.21
SEMA6C-201ENST00000341697 BMP15O95972 392 aa22.58■■□□□ 1.21
SEMA6C-201ENST00000341697 MROH5Q6ZUA9 1318 aa22.58■■□□□ 1.21
SEMA6C-201ENST00000341697 CHMP4BP1P59074 171 aa22.58■■□□□ 1.2
SEMA6C-201ENST00000341697 FGFR1OPO95684 399 aaKnown RBP22.58■■□□□ 1.2
SEMA6C-201ENST00000341697 HEATR3Q7Z4Q2 680 aa22.57■■□□□ 1.2
SEMA6C-201ENST00000341697 MYO6Q9UM54 1294 aa22.57■■□□□ 1.2
SEMA6C-201ENST00000341697 ANKARQ7Z5J8 1434 aa22.57■■□□□ 1.2
SEMA6C-201ENST00000341697 CKAP2LQ8IYA6 745 aa22.57■■□□□ 1.2
SEMA6C-201ENST00000341697 NF2P35240 595 aa22.57■■□□□ 1.2
SEMA6C-201ENST00000341697 CLEC11AQ9Y240 323 aa22.57■■□□□ 1.2
SEMA6C-201ENST00000341697 TAF5LO75529 589 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 OTUD7AQ8TE49 926 aaPredicted RBP22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 SEPT11Q9NVA2 429 aaKnown RBP22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.56■■□□□ 1.25e-31■■■■■ 745.3
SEMA6C-201ENST00000341697 KDRP35968 1356 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 ERBB3P21860 1342 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 ZNF397Q8NF99 534 aaPredicted RBP22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 MPHOSPH6Q99547 160 aaKnown RBP22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 QTRT2Q9H974 415 aaKnown RBP22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 UBE2HP62256 183 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 FKBP15Q5T1M5 1219 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 KANK3Q6NY19 840 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 TEX11Q8IYF3 940 aa22.56■■□□□ 1.2
SEMA6C-201ENST00000341697 DPP8Q6V1X1 898 aaPredicted RBP22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 WDR66Q8TBY9 1149 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 ABCC4O15439 1325 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 CHST3Q7LGC8 479 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 CCDC24Q8N4L8 307 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 CDR1P51861 262 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 PANK2Q9BZ23 570 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 CCDC102BQ68D86 513 aa22.55■■□□□ 1.2
SEMA6C-201ENST00000341697 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 AK2P54819 239 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 RUFY3Q7L099 469 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 APPBP2Q92624 585 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 USP26Q9BXU7 913 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 LOC102724428A0A0B4J2F2 783 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 IDEP14735 1019 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 TNNI2P48788 182 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 NAPAP54920 295 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 SIK1P57059 783 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 TTLL7Q6ZT98 887 aa22.54■■□□□ 1.2
SEMA6C-201ENST00000341697 HSP90AA2PQ14568 343 aaPredicted RBP22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 SAMM50Q9Y512 469 aa22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 EPB41L2O43491 1005 aaKnown RBP22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 APOBRQ0VD83 1088 aa22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 MAST3O60307 1309 aa22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 CLTCL1P53675 1640 aa22.53■■□□□ 1.2
SEMA6C-201ENST00000341697 CTSWP56202 376 aa22.52■■□□□ 1.2
SEMA6C-201ENST00000341697 HSP90B2PQ58FF3 399 aa22.52■■□□□ 1.2
SEMA6C-201ENST00000341697 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
SEMA6C-201ENST00000341697 LRRC27Q9C0I9 530 aa22.52■■□□□ 1.2
SEMA6C-201ENST00000341697 KCNG4Q8TDN1 519 aa22.52■■□□□ 1.2
SEMA6C-201ENST00000341697 CALML3P27482 149 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 RPS8P62241 208 aaKnown RBP22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 KBTBD3Q8NAB2 608 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 RRP36Q96EU6 259 aaKnown RBP22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 C6orf50Q9HD87 102 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 LMOD1P29536 600 aaPredicted RBP22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 ALDH1B1P30837 517 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 ERMNQ8TAM6 284 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 UNC13BO14795 1591 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 ERCC4Q92889 916 aaPredicted RBP22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 CERS3Q8IU89 383 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 SUPT20HQ8NEM7 779 aa22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 RNF17Q9BXT8 1623 aaKnown RBP22.51■■□□□ 1.19
SEMA6C-201ENST00000341697 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 ASAP1Q9ULH1 1129 aa22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 ARMT1Q9H993 441 aa22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 TEX35Q5T0J7 233 aa22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 CCDC129Q6ZRS4 1044 aa22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 STX1AQ16623 288 aa22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 BEND3Q5T5X7 828 aa22.5■■□□□ 1.19
SEMA6C-201ENST00000341697 BIN1O00499 593 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 CCDC181Q5TID7 509 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 FAM177A1Q8N128 213 aaPredicted RBP22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 SMARCC2Q8TAQ2 1214 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 BRPF3Q9ULD4 1205 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 TRIM21P19474 475 aaKnown RBP22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 STXBP4Q6ZWJ1 553 aa22.49■■□□□ 1.19
SEMA6C-201ENST00000341697 PCCAP05165 728 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms