RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 UBASH3AP57075 661 aa22.22■■□□□ 1.15
CDK13-202ENST00000340829 RPS6KB1P23443 525 aa22.22■■□□□ 1.15
CDK13-202ENST00000340829 CALML4Q96GE6 196 aa22.22■■□□□ 1.15
CDK13-202ENST00000340829 KCNQ3O43525 872 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 A1BGP04217 495 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 DDX17Q92841 729 aaKnown RBP22.21■■□□□ 1.15
CDK13-202ENST00000340829 SYNMO15061 1565 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 RTL1A6NKG5 1358 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 PPP1R12BO60237 982 aaPredicted RBP22.21■■□□□ 1.15
CDK13-202ENST00000340829 TSPY3P0CV98 308 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 TSPY8P0CW00 308 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 RDXP35241 583 aaKnown RBP22.21■■□□□ 1.15
CDK13-202ENST00000340829 CCDC150Q8NCX0 1101 aa22.21■■□□□ 1.15
CDK13-202ENST00000340829 MAGEB6P1A0A0J9YX57 407 aa22.2■■□□□ 1.15
CDK13-202ENST00000340829 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.15
CDK13-202ENST00000340829 SKILP12757 684 aa22.2■■□□□ 1.14
CDK13-202ENST00000340829 CEP135Q66GS9 1140 aa22.2■■□□□ 1.14
CDK13-202ENST00000340829 HELLSQ9NRZ9 838 aa22.2■■□□□ 1.14
CDK13-202ENST00000340829 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
CDK13-202ENST00000340829 USP44Q9H0E7 712 aa22.2■■□□□ 1.14
CDK13-202ENST00000340829 GCKRQ14397 625 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 FAM173BQ6P4H8 233 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 DNA2P51530 1060 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 SMARCC1Q92922 1105 aaPredicted RBP22.19■■□□□ 1.14
CDK13-202ENST00000340829 TSPYL1Q9H0U9 437 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 PLA2R1Q13018 1463 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 KDM5DQ9BY66 1539 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 TDRD12Q587J7 1177 aaKnown RBP22.19■■□□□ 1.14
CDK13-202ENST00000340829 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
CDK13-202ENST00000340829 METP08581 1390 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 FGFR1OPO95684 399 aaKnown RBP22.18■■□□□ 1.14
CDK13-202ENST00000340829 ERICH4A6NGS2 130 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 N4BP3O15049 544 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 GSTO1P78417 241 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 PRDM10Q9NQV6 1147 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 KIF24Q5T7B8 1368 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 LMOD1P29536 600 aaPredicted RBP22.18■■□□□ 1.14
CDK13-202ENST00000340829 AMPD3Q01432 767 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 CUL5Q93034 780 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 RBSNQ9H1K0 784 aa22.18■■□□□ 1.14
CDK13-202ENST00000340829 MYOM2P54296 1465 aa22.17■■□□□ 1.14
CDK13-202ENST00000340829 PYM1Q9BRP8 204 aaKnown RBP22.17■■□□□ 1.14
CDK13-202ENST00000340829 ITGA6P23229 1130 aa22.17■■□□□ 1.14
CDK13-202ENST00000340829 RRAGBQ5VZM2 374 aa22.17■■□□□ 1.14
CDK13-202ENST00000340829 CCDC191Q8NCU4 936 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 PRIMPOLQ96LW4 560 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 CGNQ9P2M7 1197 aaKnown RBP22.16■■□□□ 1.14
CDK13-202ENST00000340829 GNAT2P19087 354 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 MATR3P43243 847 aaKnown RBP eCLIP22.16■■□□□ 1.143e-6■■□□□ 12.9
CDK13-202ENST00000340829 GNG11P61952 73 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 HEATR3Q7Z4Q2 680 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 ZKSCAN3Q9BRR0 538 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 PREX2Q70Z35 1606 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 F8W031 263 aaPredicted RBP22.16■■□□□ 1.14
CDK13-202ENST00000340829 MBD4O95243 580 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 TNIP1Q15025 636 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 LUZP1Q86V48 1076 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 ST5P78524 1137 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 TRIM47Q96LD4 638 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 GBP3Q9H0R5 595 aa22.16■■□□□ 1.14
CDK13-202ENST00000340829 HLA-DOAP06340 250 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.15■■□□□ 1.142e-6■■■■■ 103
CDK13-202ENST00000340829 TRIM75PA6NK02 468 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 BMP15O95972 392 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 ZNF622Q969S3 477 aaKnown RBP eCLIP22.15■■□□□ 1.141e-6■■□□□ 13.7
CDK13-202ENST00000340829 DHX58Q96C10 678 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 C8orf37Q96NL8 207 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 CRACR2AQ9BSW2 395 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 NCOA5Q9HCD5 579 aaKnown RBP22.15■■□□□ 1.14
CDK13-202ENST00000340829 JAG2Q9Y219 1238 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 XAGE2Q96GT9 111 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
CDK13-202ENST00000340829 HSPA4P34932 840 aa22.14■■□□□ 1.14
CDK13-202ENST00000340829 CCDC40Q4G0X9 1142 aa22.14■■□□□ 1.14
CDK13-202ENST00000340829 JAKMIP3Q5VZ66 844 aa22.14■■□□□ 1.14
CDK13-202ENST00000340829 PRDM15P57071 1507 aaPredicted RBP22.14■■□□□ 1.13
CDK13-202ENST00000340829 DYNC1I1O14576 645 aa22.14■■□□□ 1.13
CDK13-202ENST00000340829 USO1O60763 962 aaKnown RBP22.14■■□□□ 1.13
CDK13-202ENST00000340829 KIF20AO95235 890 aa22.14■■□□□ 1.13
CDK13-202ENST00000340829 STAT6P42226 847 aa22.14■■□□□ 1.13
CDK13-202ENST00000340829 ZSWIM4Q9H7M6 989 aa22.14■■□□□ 1.13
CDK13-202ENST00000340829 WWC2Q6AWC2 1192 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 SSH3Q8TE77 659 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 TRMT1LQ7Z2T5 733 aaKnown RBP22.13■■□□□ 1.13
CDK13-202ENST00000340829 EDC3Q96F86 508 aaKnown RBP22.13■■□□□ 1.13
CDK13-202ENST00000340829 MCM9Q9NXL9 1143 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 A0A1B0GVL5 298 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 GIGYF1O75420 1035 aaPredicted RBP22.13■■□□□ 1.13
CDK13-202ENST00000340829 PTGS1P23219 599 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 BRAPQ7Z569 592 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 CNKSR2Q8WXI2 1034 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.13■■□□□ 1.13
CDK13-202ENST00000340829 PAXBP1Q9Y5B6 917 aa22.13■■□□□ 1.13
CDK13-202ENST00000340829 B4E1Z4 1266 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 KBTBD3Q8NAB2 608 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 PPP4R3BQ5MIZ7 849 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 TCERG1LQ5VWI1 586 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 GOLGA6L9A6NEM1 432 aa22.12■■□□□ 1.13
CDK13-202ENST00000340829 PICALMQ13492 652 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms