RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 GYG1P46976 350 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 STOX1Q6ZVD7 989 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 WWC3Q9ULE0 1092 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 MRC1P22897 1456 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 BRD1O95696 1058 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 CCDC152Q4G0S7 254 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 MTMR7Q9Y216 660 aa12.06□□□□□ -0.48
RBFOX1-202ENST00000340209 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 SLC5A1P13866 664 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 DENND2AQ9ULE3 1009 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 CUL4AQ13619 759 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 OTUD7BQ6GQQ9 843 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 SLC51AQ86UW1 340 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 PDE8BO95263 885 aa12.05□□□□□ -0.48
RBFOX1-202ENST00000340209 ZNF532Q9HCE3 1301 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 NASPP49321 788 aaPredicted RBP12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 CAMK4Q16566 473 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 KLHL40Q2TBA0 621 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 ARMT1Q9H993 441 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 IMMTQ16891 758 aaKnown RBP12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 ARFGEF2Q9Y6D5 1785 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 CPLX1O14810 134 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 TRDNQ13061 729 aa12.04□□□□□ -0.48
RBFOX1-202ENST00000340209 E7EWF7 191 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 CAMTA2O94983 1202 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 F13A1P00488 732 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 CYP2E1P05181 493 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 TDO2P48775 406 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 GPR101Q96P66 508 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 ZNF213O14771 459 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 KRT32Q14532 448 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 ZMYM1Q5SVZ6 1142 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 MBD4O95243 580 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 HSPA1LP34931 641 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 RFC4P35249 363 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 MRE11P49959 708 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 PUM3Q15397 648 aaKnown RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 LRRFIP1Q32MZ4 808 aaKnown RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
RBFOX1-202ENST00000340209 CIAO1O76071 339 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 FGAP02671 866 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 CHRNDQ07001 517 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 BICD2Q8TD16 824 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 AK7Q96M32 723 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 TNS2Q63HR2 1409 aa12.02□□□□□ -0.48
RBFOX1-202ENST00000340209 GOLGA8BA8MQT2 603 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 PRKAB2O43741 272 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 PTMSP20962 102 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 RASGRF1Q13972 1273 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 MICU3Q86XE3 530 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 ST3GAL1Q11201 340 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 ANKRD1Q15327 319 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
RBFOX1-202ENST00000340209 CSF1RP07333 972 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 ZNF34Q8IZ26 560 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 B4E1Z4 1266 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 PTMAP06454 111 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 TRIM28Q13263 835 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 CELF1Q92879 486 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 NAPBQ9H115 298 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 GJB4Q9NTQ9 266 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 PRC1O43663 620 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 GNL2Q13823 731 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 HELLSQ9NRZ9 838 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 RPAP1Q9BWH6 1393 aaPredicted RBP12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 PDE6AP16499 860 aa12.01□□□□□ -0.49
RBFOX1-202ENST00000340209 FAM196AQ6ZSG2 479 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms